Literature DB >> 32062837

Studying viruses using solution X-ray scattering.

Daniel Khaykelson1, Uri Raviv2,3.   

Abstract

Viruses have been of interest to mankind since their discovery as small infectious agents in the nineteenth century. Because many viruses cause diseases to humans and agriculture, they were rigorously studied for biological and medical purposes. Viruses have remarkable properties such as the symmetry and self-assembly of their protein envelope, maturation into infectious virions, structural stability, and disassembly. Solution X-ray scattering can probe structures and reactions in solutions, down to subnanometer spatial resolution and millisecond temporal resolution. It probes the bulk solution and reveals the average shape and average mass of particles in solution and can be used to study kinetics and thermodynamics of viruses at different stages of their life cycle. Here we review recent work that demonstrates the capabilities of solution X-ray scattering to study in vitro the viral life cycle.

Entities:  

Keywords:  HBV; SAXS; SV40; Self-assembly; Time-resolved SAXS; Virology

Year:  2020        PMID: 32062837      PMCID: PMC7040123          DOI: 10.1007/s12551-020-00617-4

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  58 in total

1.  Modeling Viral Capsid Assembly.

Authors:  Michael F Hagan
Journal:  Adv Chem Phys       Date:  2014       Impact factor: 1.000

2.  Small Angle X-ray Scattering for Nanoparticle Research.

Authors:  Tao Li; Andrew J Senesi; Byeongdu Lee
Journal:  Chem Rev       Date:  2016-04-07       Impact factor: 60.622

3.  Reciprocal Grids: A Hierarchical Algorithm for Computing Solution X-ray Scattering Curves from Supramolecular Complexes at High Resolution.

Authors:  Avi Ginsburg; Tal Ben-Nun; Roi Asor; Asaf Shemesh; Israel Ringel; Uri Raviv
Journal:  J Chem Inf Model       Date:  2016-07-29       Impact factor: 4.956

4.  W. M. Stanley's crystallization of the tobacco mosaic virus, 1930-1940.

Authors:  L E Kay
Journal:  Isis       Date:  1986-09       Impact factor: 0.688

5.  Nucleation and growth phases in the polymerization of coat and scaffolding subunits into icosahedral procapsid shells.

Authors:  P E Prevelige; D Thomas; J King
Journal:  Biophys J       Date:  1993-03       Impact factor: 4.033

Review 6.  Mechanisms of virus assembly.

Authors:  Jason D Perlmutter; Michael F Hagan
Journal:  Annu Rev Phys Chem       Date:  2014-12-17       Impact factor: 12.703

7.  Analysis of rapid, large-scale protein quaternary structural changes: time-resolved X-ray solution scattering of Nudaurelia capensis omega virus (NomegaV) maturation.

Authors:  M A Canady; H Tsuruta; J E Johnson
Journal:  J Mol Biol       Date:  2001-08-24       Impact factor: 5.469

8.  Electrophoretic mobilities of a viral capsid, its capsid protein, and their relation to viral assembly.

Authors:  J R Vega-Acosta; R D Cadena-Nava; W M Gelbart; C M Knobler; J Ruiz-García
Journal:  J Phys Chem B       Date:  2014-02-14       Impact factor: 2.991

9.  Review of the fundamental theories behind small angle X-ray scattering, molecular dynamics simulations, and relevant integrated application.

Authors:  Lauren Boldon; Fallon Laliberte; Li Liu
Journal:  Nano Rev       Date:  2015-02-25

10.  Nonequilibrium self-assembly dynamics of icosahedral viral capsids packaging genome or polyelectrolyte.

Authors:  Maelenn Chevreuil; Didier Law-Hine; Jingzhi Chen; Stéphane Bressanelli; Sophie Combet; Doru Constantin; Jéril Degrouard; Johannes Möller; Mehdi Zeghal; Guillaume Tresset
Journal:  Nat Commun       Date:  2018-08-06       Impact factor: 14.919

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  5 in total

1.  A new decade for Biophysical Reviews and a look into the future of biophysics.

Authors:  Damien Hall
Journal:  Biophys Rev       Date:  2020-01-29

2.  Assembly and Stability of Simian Virus 40 Polymorphs.

Authors:  Curt Waltmann; Roi Asor; Uri Raviv; Monica Olvera de la Cruz
Journal:  ACS Nano       Date:  2020-04-02       Impact factor: 15.881

Review 3.  Stunning symmetries involved in the self-assembly of the HSV-1 capsid.

Authors:  Joo-Hyeon Lee; Jaehyu Shim; Seung Joong Kim
Journal:  J Korean Phys Soc       Date:  2021-02-09       Impact factor: 0.657

Review 4.  In Vitro Assembly of Virus-Like Particles and Their Applications.

Authors:  Dinh To Le; Kristian M Müller
Journal:  Life (Basel)       Date:  2021-04-10

5.  Rapidly Forming Early Intermediate Structures Dictate the Pathway of Capsid Assembly.

Authors:  Roi Asor; Christopher John Schlicksup; Zhongchao Zhao; Adam Zlotnick; Uri Raviv
Journal:  J Am Chem Soc       Date:  2020-04-20       Impact factor: 15.419

  5 in total

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