Literature DB >> 27016708

Recent advances in coarse-grained modeling of virus assembly.

Michael F Hagan1, Roya Zandi2.   

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Year:  2016        PMID： 27016708      PMCID： PMC4983515          DOI： 10.1016/j.coviro.2016.02.012

Source DB:  PubMed          Journal:  Curr Opin Virol        ISSN： 1879-6257            Impact factor:   7.090


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  69 in total

1.  Role of RNA Branchedness in the Competition for Viral Capsid Proteins.

Authors:  Surendra W Singaram; Rees F Garmann; Charles M Knobler; William M Gelbart; Avinoam Ben-Shaul
Journal:  J Phys Chem B       Date:  2015-10-19       Impact factor: 2.991

2.  Irreversible growth model for virus capsid assembly.

Authors:  Stephen D Hicks; C L Henley
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-09-25

3.  Size regulation of ss-RNA viruses.

Authors:  Roya Zandi; Paul van der Schoot
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

4.  Synonymous mutations reduce genome compactness in icosahedral ssRNA viruses.

Authors:  Luca Tubiana; Anže Lošdorfer Božič; Cristian Micheletti; Rudolf Podgornik
Journal:  Biophys J       Date:  2015-01-06       Impact factor: 4.033

5.  Solving a Levinthal's paradox for virus assembly identifies a unique antiviral strategy.

Authors:  Eric C Dykeman; Peter G Stockley; Reidun Twarock
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-24       Impact factor: 11.205

6.  A parameter estimation technique for stochastic self-assembly systems and its application to human papillomavirus self-assembly.

Authors:  M Senthil Kumar; Russell Schwartz
Journal:  Phys Biol       Date:  2010-12-09       Impact factor: 2.583

7.  The Role of Packaging Sites in Efficient and Specific Virus Assembly.

Authors:  Jason D Perlmutter; Michael F Hagan
Journal:  J Mol Biol       Date:  2015-05-16       Impact factor: 5.469

8.  Differential segregation of nodaviral coat protein and RNA into progeny virions during mixed infection with FHV and NoV.

Authors:  Radhika Gopal; P Arno Venter; Anette Schneemann
Journal:  Virology       Date:  2014-03-21       Impact factor: 3.616

9.  Asymmetric genome organization in an RNA virus revealed via graph-theoretical analysis of tomographic data.

Authors:  James A Geraets; Eric C Dykeman; Peter G Stockley; Neil A Ranson; Reidun Twarock
Journal:  PLoS Comput Biol       Date:  2015-03-20       Impact factor: 4.475

10.  Dynamics of self-assembly of model viral capsids in the presence of a fluctuating membrane.

Authors:  Richard Matthews; Christos N Likos
Journal:  J Phys Chem B       Date:  2013-06-21       Impact factor: 2.991
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  34 in total

1.  A Model for Viral Assembly around an Explicit RNA Sequence Generates an Implicit Fitness Landscape.

Authors:  Eric Charles Dykeman
Journal:  Biophys J       Date:  2017-08-08       Impact factor: 4.033

2.  Reaction-diffusion basis of retroviral infectivity.

Authors:  S Kashif Sadiq
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-11-13       Impact factor: 4.226

3.  Electrostatics-Driven Inflation of Elastic Icosahedral Shells as a Model for Swelling of Viruses.

Authors:  Anže Lošdorfer Božič; Antonio Šiber
Journal:  Biophys J       Date:  2018-08-07       Impact factor: 4.033

4.  Unraveling the Motions behind Enterovirus 71 Uncoating.

Authors:  Caroline J Ross; Ali Rana Atilgan; Özlem Tastan Bishop; Canan Atilgan
Journal:  Biophys J       Date:  2018-02-27       Impact factor: 4.033

Review 5.  Physical, chemical, and synthetic virology: Reprogramming viruses as controllable nanodevices.

Authors:  Maria Yanqing Chen; Susan S Butler; Weitong Chen; Junghae Suh
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2018-11-08

Review 6.  Virus capsid assembly across different length scales inspire the development of virus-based biomaterials.

Authors:  Ekaterina Selivanovitch; Trevor Douglas
Journal:  Curr Opin Virol       Date:  2019-05-06       Impact factor: 7.090

7.  A Multiscale Model for the Self-Assembly of Coat Proteins in Bacteriophage MS2.

Authors:  Bo Wang; Junjie Zhang; Yinghao Wu
Journal:  J Chem Inf Model       Date:  2019-08-23       Impact factor: 4.956

8.  Kinetics of Surface-Driven Self-Assembly and Fatigue-Induced Disassembly of a Virus-Based Nanocoating.

Authors:  Alejandro Valbuena; Mauricio G Mateu
Journal:  Biophys J       Date:  2017-02-28       Impact factor: 4.033

9.  Computational simulations of TNF receptor oligomerization on plasma membrane.

Authors:  Zhaoqian Su; Yinghao Wu
Journal:  Proteins       Date:  2019-11-18

10.  Why large icosahedral viruses need scaffolding proteins.

Authors:  Siyu Li; Polly Roy; Alex Travesset; Roya Zandi
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-09       Impact factor: 11.205
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