Literature DB >> 18643099

Controlling viral capsid assembly with templating.

Michael F Hagan1.   

Abstract

We develop coarse-grained models that describe the dynamic encapsidation of functionalized nanoparticles by viral capsid proteins. We find that some forms of cooperative interactions between protein subunits and nanoparticles can dramatically enhance rates and robustness of assembly, as compared to the spontaneous assembly of subunits into empty capsids. For large core-subunit interactions, subunits adsorb onto core surfaces en masse in a disordered manner, and then undergo a cooperative rearrangement into an ordered capsid structure. These assembly pathways are unlike any identified for empty capsid formation. Our models can be directly applied to recent experiments in which viral capsid proteins assemble around functionalized inorganic nanoparticles [Sun, Proc. Natl. Acad. Sci. U.S.A. 104, 1354 (2007)]. In addition, we discuss broader implications for understanding the dynamic encapsidation of single-stranded genomic molecules during viral replication and for developing multicomponent nanostructured materials.

Entities:  

Mesh:

Year:  2008        PMID: 18643099      PMCID: PMC2758267          DOI: 10.1103/PhysRevE.77.051904

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  71 in total

1.  Gold nanoparticles as spectroscopic enhancers for in vitro studies on single viruses.

Authors:  Bogdan Dragnea; Chao Chen; Eun-Soo Kwak; Barry Stein; C Cheng Kao
Journal:  J Am Chem Soc       Date:  2003-05-28       Impact factor: 15.419

2.  Structure of small viruses.

Authors:  F H CRICK; J D WATSON
Journal:  Nature       Date:  1956-03-10       Impact factor: 49.962

Review 3.  Novel tracing paradigms--genetically engineered herpesviruses as tools for mapping functional circuits within the CNS: present status and future prospects.

Authors:  Zsolt Boldogköi; Attila Sík; Adám Dénes; Anikó Reichart; József Toldi; Ida Gerendai; Krisztina J Kovács; Miklós Palkovits
Journal:  Prog Neurobiol       Date:  2004-04       Impact factor: 11.685

4.  In vitro papillomavirus capsid assembly analyzed by light scattering.

Authors:  Greg L Casini; David Graham; David Heine; Robert L Garcea; David T Wu
Journal:  Virology       Date:  2004-08-01       Impact factor: 3.616

Review 5.  Virus-like particles as vaccines and vessels for the delivery of small molecules.

Authors:  Robert L Garcea; Lutz Gissmann
Journal:  Curr Opin Biotechnol       Date:  2004-12       Impact factor: 9.740

6.  Self-assembly of polyhedral shells: a molecular dynamics study.

Authors:  D C Rapaport
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-11-15

7.  Irreversible growth model for virus capsid assembly.

Authors:  Stephen D Hicks; C L Henley
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-09-25

8.  Nucleation and growth phases in the polymerization of coat and scaffolding subunits into icosahedral procapsid shells.

Authors:  P E Prevelige; D Thomas; J King
Journal:  Biophys J       Date:  1993-03       Impact factor: 4.033

9.  A virus-based nanoblock with tunable electrostatic properties.

Authors:  Anju Chatterji; Wendy F Ochoa; Takafumi Ueno; Tianwei Lin; John E Johnson
Journal:  Nano Lett       Date:  2005-04       Impact factor: 11.189

10.  Mechanism of capsid assembly for an icosahedral plant virus.

Authors:  A Zlotnick; R Aldrich; J M Johnson; P Ceres; M J Young
Journal:  Virology       Date:  2000-11-25       Impact factor: 3.616

View more
  34 in total

1.  Langevin dynamics simulation of polymer-assisted virus-like assembly.

Authors:  J P Mahalik; M Muthukumar
Journal:  J Chem Phys       Date:  2012-04-07       Impact factor: 3.488

2.  Exploring the paths of (virus) assembly.

Authors:  Paul Moisant; Henry Neeman; Adam Zlotnick
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

3.  Understanding the concentration dependence of viral capsid assembly kinetics--the origin of the lag time and identifying the critical nucleus size.

Authors:  Michael F Hagan; Oren M Elrad
Journal:  Biophys J       Date:  2010-03-17       Impact factor: 4.033

4.  Mechanisms of capsid assembly around a polymer.

Authors:  Aleksandr Kivenson; Michael F Hagan
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

5.  Modeling Viral Capsid Assembly.

Authors:  Michael F Hagan
Journal:  Adv Chem Phys       Date:  2014       Impact factor: 1.000

6.  A theory for viral capsid assembly around electrostatic cores.

Authors:  Michael F Hagan
Journal:  J Chem Phys       Date:  2009-03-21       Impact factor: 3.488

7.  Self-assembly of convex particles on spherocylindrical surfaces.

Authors:  Guillermo R Lázaro; Bogdan Dragnea; Michael F Hagan
Journal:  Soft Matter       Date:  2018-07-18       Impact factor: 3.679

8.  Self-assembly approaches to nanomaterial encapsulation in viral protein cages.

Authors:  Stella E Aniagyei; Christopher Dufort; C Cheng Kao; Bogdan Dragnea
Journal:  J Mater Chem       Date:  2008-01-01

9.  Simulated self-assembly of the HIV-1 capsid: protein shape and native contacts are sufficient for two-dimensional lattice formation.

Authors:  Bo Chen; Robert Tycko
Journal:  Biophys J       Date:  2011-06-22       Impact factor: 4.033

10.  Mechanisms of size control and polymorphism in viral capsid assembly.

Authors:  Oren M Elrad; Michael F Hagan
Journal:  Nano Lett       Date:  2008-10-25       Impact factor: 11.189

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.