Literature DB >> 18084292

Common genetic variants at the CRAC1 (HMPS) locus on chromosome 15q13.3 influence colorectal cancer risk.

Emma Jaeger1, Emily Webb, Kimberley Howarth, Luis Carvajal-Carmona, Andrew Rowan, Peter Broderick, Axel Walther, Sarah Spain, Alan Pittman, Zoe Kemp, Kate Sullivan, Karl Heinimann, Steven Lubbe, Enric Domingo, Ella Barclay, Lynn Martin, Maggie Gorman, Ian Chandler, Jayaram Vijayakrishnan, Wendy Wood, Elli Papaemmanuil, Steven Penegar, Mobshra Qureshi, Susan Farrington, Albert Tenesa, Jean-Baptiste Cazier, David Kerr, Richard Gray, Julian Peto, Malcolm Dunlop, Harry Campbell, Huw Thomas, Richard Houlston, Ian Tomlinson.   

Abstract

We mapped a high-penetrance gene (CRAC1; also known as HMPS) associated with colorectal cancer (CRC) in the Ashkenazi population to a 0.6-Mb region on chromosome 15 containing SCG5 (also known as SGNE1), GREM1 and FMN1. We hypothesized that the CRAC1 locus harbored low-penetrance variants that increased CRC risk in the general population. In a large series of colorectal cancer cases and controls, SNPs near GREM1 and SCG5 were strongly associated with increased CRC risk (for rs4779584, P = 4.44 x 10(-14)).

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Year:  2007        PMID: 18084292     DOI: 10.1038/ng.2007.41

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  152 in total

1.  GWAS-identified colorectal cancer susceptibility loci associated with clinical outcomes.

Authors:  Jingyao Dai; Jian Gu; Maosheng Huang; Cathy Eng; E Scott Kopetz; Lee M Ellis; Ernest Hawk; Xifeng Wu
Journal:  Carcinogenesis       Date:  2012-04-12       Impact factor: 4.944

2.  Generalizability and epidemiologic characterization of eleven colorectal cancer GWAS hits in multiple populations.

Authors:  Jing He; Lynne R Wilkens; Daniel O Stram; Laurence N Kolonel; Brian E Henderson; Anna H Wu; Loic Le Marchand; Christopher A Haiman
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-11-11       Impact factor: 4.254

Review 3.  A compendium of genome-wide associations for cancer: critical synopsis and reappraisal.

Authors:  John P A Ioannidis; Peter Castaldi; Evangelos Evangelou
Journal:  J Natl Cancer Inst       Date:  2010-05-26       Impact factor: 13.506

4.  Low-penetrance susceptibility variants in familial colorectal cancer.

Authors:  Iina Niittymäki; Eevi Kaasinen; Sari Tuupanen; Auli Karhu; Heikki Järvinen; Jukka-Pekka Mecklin; Ian P M Tomlinson; Maria Chiara Di Bernardo; Richard S Houlston; Lauri A Aaltonen
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-05-25       Impact factor: 4.254

5.  A genome-wide scan of 10 000 gene-centric variants and colorectal cancer risk.

Authors:  Emily Webb; Peter Broderick; Steven Lubbe; Ian Chandler; Ian Tomlinson; Richard S Houlston
Journal:  Eur J Hum Genet       Date:  2009-05-27       Impact factor: 4.246

6.  Joint analysis of tightly linked SNPs in screening step of genome-wide association studies leads to increased power.

Authors:  Tim Becker; Christine Herold
Journal:  Eur J Hum Genet       Date:  2009-02-18       Impact factor: 4.246

7.  The colorectal cancer risk at 18q21 is caused by a novel variant altering SMAD7 expression.

Authors:  Alan M Pittman; Silvia Naranjo; Emily Webb; Peter Broderick; Esther H Lips; Tom van Wezel; Hans Morreau; Kate Sullivan; Sarah Fielding; Philip Twiss; Jayaram Vijayakrishnan; Fernando Casares; Mobshra Qureshi; José Luis Gómez-Skarmeta; Richard S Houlston
Journal:  Genome Res       Date:  2009-04-24       Impact factor: 9.043

8.  The genotype of the transporter associated with antigen processing gene affects susceptibility to colorectal cancer in Japanese.

Authors:  Takenori Yamauchi; Shouhei Takeuchi; Naoki Maehara; Yoshiki Kuroda
Journal:  Environ Health Prev Med       Date:  2014-05-07       Impact factor: 3.674

9.  Evaluation of genetic variants in association with colorectal cancer risk and survival in Asians.

Authors:  Nan Wang; Yingchang Lu; Nikhil K Khankari; Jirong Long; Hong-Lan Li; Jing Gao; Yu-Tang Gao; Yong-Bing Xiang; Xiao-Ou Shu; Wei Zheng
Journal:  Int J Cancer       Date:  2017-06-21       Impact factor: 7.396

10.  Behavioral and psychosocial responses to genomic testing for colorectal cancer risk.

Authors:  Kristi D Graves; Kara-Grace Leventhal; Rachel Nusbaum; Yasmin Salehizadeh; Gillian W Hooker; Beth N Peshkin; Morgan Butrick; William Tuong; Jeena Mathew; David Goerlitz; Mary B Fishman; Peter G Shields; Marc D Schwartz
Journal:  Genomics       Date:  2013-04-11       Impact factor: 5.736

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