Literature DB >> 20501757

Low-penetrance susceptibility variants in familial colorectal cancer.

Iina Niittymäki1, Eevi Kaasinen, Sari Tuupanen, Auli Karhu, Heikki Järvinen, Jukka-Pekka Mecklin, Ian P M Tomlinson, Maria Chiara Di Bernardo, Richard S Houlston, Lauri A Aaltonen.   

Abstract

BACKGROUND: Genomewide association studies have identified 10 low-penetrance loci that confer modestly increased risk for colorectal cancer (CRC). Although they underlie a significant proportion of CRC in the general population, their impact on the familial risk for CRC has yet to be formally enumerated. The aim of this study was to examine the combined contribution of the 10 variants, rs6983267, rs4779584, rs4939827, rs16892766, rs10795668, rs3802842, rs4444235, rs9929218, rs10411210, and rs961253, on familial CRC.
METHODS: The population-based series of CRC samples included in this study consisted of 97 familial cases and 691 sporadic cases. Genotypes in the 10 loci and clinical data, including family history of cancer verified from the Finnish Cancer Registry, were available. The overall number of risk alleles (0-20) was determined, and its association with familial CRC was analyzed. Excess familial risk was estimated using cancer incidence data from the first-degree relatives of the cases.
RESULTS: A linear association between the number of risk alleles and familial CRC was observed (P = 0.006). With each risk-allele addition, the odds of having an affected first-degree relative increased by 1.16 (95% confidence interval, 1.04-1.30). The 10 low-penetrance loci collectively explain approximately 9% of the variance in familial risk for CRC.
CONCLUSIONS: This study provides evidence to support the previous indirect estimations that these low-penetrance variants account for a relatively small proportion of the familial aggregation of CRC. IMPACT: Our results emphasize the need to characterize the remaining molecular basis of familial CRC, which should eventually yield in individualized targeting of preventive interventions. Copyright 2010 AACR.

Entities:  

Mesh:

Year:  2010        PMID: 20501757      PMCID: PMC2883738          DOI: 10.1158/1055-9965.EPI-09-1320

Source DB:  PubMed          Journal:  Cancer Epidemiol Biomarkers Prev        ISSN: 1055-9965            Impact factor:   4.254


  23 in total

1.  Explaining the familial colorectal cancer risk associated with mismatch repair (MMR)-deficient and MMR-stable tumors.

Authors:  Lauri Aaltonen; Louise Johns; Heikki Järvinen; Jukka-Pekka Mecklin; Richard Houlston
Journal:  Clin Cancer Res       Date:  2007-01-01       Impact factor: 12.531

2.  A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk.

Authors:  Peter Broderick; Luis Carvajal-Carmona; Alan M Pittman; Emily Webb; Kimberley Howarth; Andrew Rowan; Steven Lubbe; Sarah Spain; Kate Sullivan; Sarah Fielding; Emma Jaeger; Jayaram Vijayakrishnan; Zoe Kemp; Maggie Gorman; Ian Chandler; Elli Papaemmanuil; Steven Penegar; Wendy Wood; Gabrielle Sellick; Mobshra Qureshi; Ana Teixeira; Enric Domingo; Ella Barclay; Lynn Martin; Oliver Sieber; David Kerr; Richard Gray; Julian Peto; Jean-Baptiste Cazier; Ian Tomlinson; Richard S Houlston
Journal:  Nat Genet       Date:  2007-10-14       Impact factor: 38.330

3.  Population-based molecular detection of hereditary nonpolyposis colorectal cancer.

Authors:  R Salovaara; A Loukola; P Kristo; H Kääriäinen; H Ahtola; M Eskelinen; N Härkönen; R Julkunen; E Kangas; S Ojala; J Tulikoura; E Valkamo; H Järvinen; J P Mecklin; L A Aaltonen; A de la Chapelle
Journal:  J Clin Oncol       Date:  2000-06       Impact factor: 44.544

4.  Incidence of hereditary nonpolyposis colorectal cancer and the feasibility of molecular screening for the disease.

Authors:  L A Aaltonen; R Salovaara; P Kristo; F Canzian; A Hemminki; P Peltomäki; R B Chadwick; H Kääriäinen; M Eskelinen; H Järvinen; J P Mecklin; A de la Chapelle
Journal:  N Engl J Med       Date:  1998-05-21       Impact factor: 91.245

5.  Cohort study analysis with a FORTRAN computer program.

Authors:  M Coleman; A Douglas; C Hermon; J Peto
Journal:  Int J Epidemiol       Date:  1986-03       Impact factor: 7.196

Review 6.  A systematic review and meta-analysis of familial colorectal cancer risk.

Authors:  L E Johns; R S Houlston
Journal:  Am J Gastroenterol       Date:  2001-10       Impact factor: 10.864

Review 7.  New insights into the aetiology of colorectal cancer from genome-wide association studies.

Authors:  Albert Tenesa; Malcolm G Dunlop
Journal:  Nat Rev Genet       Date:  2009-06       Impact factor: 53.242

8.  A common genetic risk factor for colorectal and prostate cancer.

Authors:  Christopher A Haiman; Loïc Le Marchand; Jennifer Yamamato; Daniel O Stram; Xin Sheng; Laurence N Kolonel; Anna H Wu; David Reich; Brian E Henderson
Journal:  Nat Genet       Date:  2007-07-08       Impact factor: 38.330

9.  Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24.

Authors:  Brent W Zanke; Celia M T Greenwood; Jagadish Rangrej; Rafal Kustra; Albert Tenesa; Susan M Farrington; James Prendergast; Sylviane Olschwang; Theodore Chiang; Edgar Crowdy; Vincent Ferretti; Philippe Laflamme; Saravanan Sundararajan; Stéphanie Roumy; Jean-François Olivier; Frédérick Robidoux; Robert Sladek; Alexandre Montpetit; Peter Campbell; Stephane Bezieau; Anne Marie O'Shea; George Zogopoulos; Michelle Cotterchio; Polly Newcomb; John McLaughlin; Ban Younghusband; Roger Green; Jane Green; Mary E M Porteous; Harry Campbell; Helene Blanche; Mourad Sahbatou; Emmanuel Tubacher; Catherine Bonaiti-Pellié; Bruno Buecher; Elio Riboli; Sebastien Kury; Stephen J Chanock; John Potter; Gilles Thomas; Steven Gallinger; Thomas J Hudson; Malcolm G Dunlop
Journal:  Nat Genet       Date:  2007-07-08       Impact factor: 38.330

10.  A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21.

Authors:  Ian Tomlinson; Emily Webb; Luis Carvajal-Carmona; Peter Broderick; Zoe Kemp; Sarah Spain; Steven Penegar; Ian Chandler; Maggie Gorman; Wendy Wood; Ella Barclay; Steven Lubbe; Lynn Martin; Gabrielle Sellick; Emma Jaeger; Richard Hubner; Ruth Wild; Andrew Rowan; Sarah Fielding; Kimberley Howarth; Andrew Silver; Wendy Atkin; Kenneth Muir; Richard Logan; David Kerr; Elaine Johnstone; Oliver Sieber; Richard Gray; Huw Thomas; Julian Peto; Jean-Baptiste Cazier; Richard Houlston
Journal:  Nat Genet       Date:  2007-07-08       Impact factor: 38.330

View more
  11 in total

Review 1.  Genetic predisposition to colorectal cancer: where we stand and future perspectives.

Authors:  Laura Valle
Journal:  World J Gastroenterol       Date:  2014-08-07       Impact factor: 5.742

Review 2.  Multiple primary colorectal cancer: Individual or familial predisposition?

Authors:  José A Pajares; José Perea
Journal:  World J Gastrointest Oncol       Date:  2015-12-15

3.  Quantitative assessment of the influence of common variation rs16892766 at 8q23.3 with colorectal adenoma and cancer susceptibility.

Authors:  Ming Li; Yahong Gu
Journal:  Mol Genet Genomics       Date:  2014-10-08       Impact factor: 3.291

4.  Genetic variants on chromosome 8q24 and colorectal neoplasia risk: a case-control study in China and a meta-analysis of the published literature.

Authors:  Mian Li; Yanhong Zhou; Peizhan Chen; Huan Yang; Xiaoyan Yuan; Kazuo Tajima; Jia Cao; Hui Wang
Journal:  PLoS One       Date:  2011-03-24       Impact factor: 3.240

5.  A common SMAD7 variant is associated with risk of colorectal cancer: evidence from a case-control study and a meta-analysis.

Authors:  Qibin Song; Beibei Zhu; Weiguo Hu; Liming Cheng; Hongyun Gong; Bin Xu; Xiawen Zheng; Li Zou; Rong Zhong; Shengyu Duan; Wei Chen; Rui Rui; Jing Wu; Xiaoping Miao
Journal:  PLoS One       Date:  2012-03-21       Impact factor: 3.240

6.  The SNP rs961253 in 20p12.3 is associated with colorectal cancer risk: a case-control study and a meta-analysis of the published literature.

Authors:  Xiawen Zheng; Li Wang; Yaowu Zhu; Qing Guan; Huijun Li; Zhigang Xiong; Lingyan Deng; Jie Lu; Xiaoping Miao; Liming Cheng
Journal:  PLoS One       Date:  2012-04-11       Impact factor: 3.240

7.  Restoring vision through "Project Prakash": the opportunities for merging science and service.

Authors:  Pawan Sinha; Garga Chatterjee; Tapan Gandhi; Amy Kalia
Journal:  PLoS Biol       Date:  2013-12-17       Impact factor: 8.029

8.  The common variant rs4444235 near BMP4 confers genetic susceptibility of colorectal cancer: an updated meta-analysis based on a comprehensive statistical strategy.

Authors:  Li Liu; Qinji Su; Lixia Li; Xiaohui Lin; Yu Gan; Sidong Chen
Journal:  PLoS One       Date:  2014-06-16       Impact factor: 3.240

9.  Genetic variations in SMAD7 are associated with colorectal cancer risk in the colon cancer family registry.

Authors:  Xuejuan Jiang; J Esteban Castelao; David Vandenberg; Angel Carracedo; Carmen M Redondo; David V Conti; Jesus P Paredes Cotoré; John D Potter; Polly A Newcomb; Michael N Passarelli; Mark A Jenkins; John L Hopper; Steven Gallinger; Loic Le Marchand; María E Martínez; Dennis J Ahnen; John A Baron; Noralane M Lindor; Robert W Haile; Manuela Gago-Dominguez
Journal:  PLoS One       Date:  2013-04-03       Impact factor: 3.240

10.  Eleven candidate susceptibility genes for common familial colorectal cancer.

Authors:  Alexandra E Gylfe; Riku Katainen; Johanna Kondelin; Tomas Tanskanen; Tatiana Cajuso; Ulrika Hänninen; Jussi Taipale; Minna Taipale; Laura Renkonen-Sinisalo; Heikki Järvinen; Jukka-Pekka Mecklin; Outi Kilpivaara; Esa Pitkänen; Pia Vahteristo; Sari Tuupanen; Auli Karhu; Lauri A Aaltonen
Journal:  PLoS Genet       Date:  2013-10-17       Impact factor: 5.917

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.