Literature DB >> 17951727

Preparation of oriented, fully hydrated lipid samples for structure determination using X-ray scattering.

Stephanie A Tristram-Nagle1.   

Abstract

This chapter describes a method of sample preparation called "the rock and roll method," which is basically a solvent evaporation technique with controlled manual sample movement during evaporation of solvent from lipid/solvent mixtures that produces well-oriented thick stacks of about 2000 lipid bilayers. Many lipid types have been oriented using different solvent mixtures that balance solubilization of the lipid with uniform deposition of the lipid solution onto solid substrates. These well-oriented thick stacks are then ideal samples for collection of both X-ray diffraction data in the gel phase and X-ray diffuse scattering data in the fluid phase of lipids. The degree of orientation is determined using visual inspection, polarizing microscopy, and a mosaic spread X-ray experiment. Atomic force microscopy is used to compare samples prepared using the rock and roll method with those prepared by spin-coating, which produces well-oriented but less homogeneous lipid stacks. These samples can be fully hydrated through the vapor provided that the hydration chamber has excellent temperature and humidity control.

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Year:  2007        PMID: 17951727      PMCID: PMC2697614          DOI: 10.1007/978-1-59745-519-0_5

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

1.  Method for obtaining structure and interactions from oriented lipid bilayers.

Authors:  Y Lyatskaya; Y Liu; S Tristram-Nagle; J Katsaras; J F Nagle
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2000-12-22

2.  Absence of a vestigial vapor pressure paradox.

Authors:  J F Nagle; J Katsaras
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1999-06

3.  Diffuse scattering provides material parameters and electron density profiles of biomembranes.

Authors:  Yufeng Liu; John F Nagle
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-04-30

4.  The hydration of phospholipids.

Authors:  G L Jendrasiak; J H Hasty
Journal:  Biochim Biophys Acta       Date:  1974-01-23

5.  Structure of fully hydrated fluid phase DMPC and DLPC lipid bilayers using X-ray scattering from oriented multilamellar arrays and from unilamellar vesicles.

Authors:  Norbert Kucerka; Yufeng Liu; Nanjun Chu; Horia I Petrache; Stephanie Tristram-Nagle; John F Nagle
Journal:  Biophys J       Date:  2005-01-21       Impact factor: 4.033

6.  An innovative procedure using a sublimable solid to align lipid bilayers for solid-state NMR studies.

Authors:  Kevin J Hallock; Katherine Henzler Wildman; Dong-Kuk Lee; Ayyalusamy Ramamoorthy
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

7.  Measurement of chain tilt angle in fully hydrated bilayers of gel phase lecithins.

Authors:  S Tristram-Nagle; R Zhang; R M Suter; C R Worthington; W J Sun; J F Nagle
Journal:  Biophys J       Date:  1993-04       Impact factor: 4.033

8.  Fatty-acid chain tilt angles and directions in dipalmitoyl phosphatidylcholine bilayers.

Authors:  J Katsaras; D S Yang; R M Epand
Journal:  Biophys J       Date:  1992-10       Impact factor: 4.033

Review 9.  Lipid bilayers: thermodynamics, structure, fluctuations, and interactions.

Authors:  Stephanie Tristram-Nagle; John F Nagle
Journal:  Chem Phys Lipids       Date:  2004-01       Impact factor: 3.329

10.  Alignment and defect structures in oriented phosphatidylcholine multilayers.

Authors:  S A Asher; P S Pershan
Journal:  Biophys J       Date:  1979-09       Impact factor: 4.033

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  37 in total

1.  Temperature dependence of structure, bending rigidity, and bilayer interactions of dioleoylphosphatidylcholine bilayers.

Authors:  Jianjun Pan; Stephanie Tristram-Nagle; Norbert Kucerka; John F Nagle
Journal:  Biophys J       Date:  2007-09-07       Impact factor: 4.033

2.  Membrane structure correlates to function of LLP2 on the cytoplasmic tail of HIV-1 gp41 protein.

Authors:  Alexander L Boscia; Kiyotaka Akabori; Zachary Benamram; Jonathan A Michel; Michael S Jablin; Jonathan D Steckbeck; Ronald C Montelaro; John F Nagle; Stephanie Tristram-Nagle
Journal:  Biophys J       Date:  2013-08-06       Impact factor: 4.033

3.  Structure and water permeability of fully hydrated diphytanoylPC.

Authors:  Stephanie Tristram-Nagle; Dong Joo Kim; Nadia Akhunzada; Norbert Kucerka; John C Mathai; John Katsaras; Mark Zeidel; John F Nagle
Journal:  Chem Phys Lipids       Date:  2010-05-04       Impact factor: 3.329

4.  HIV-1 Tat membrane interactions probed using X-ray and neutron scattering, CD spectroscopy and MD simulations.

Authors:  Kiyotaka Akabori; Kun Huang; Bradley W Treece; Michael S Jablin; Brian Maranville; Arthur Woll; John F Nagle; Angel E Garcia; Stephanie Tristram-Nagle
Journal:  Biochim Biophys Acta       Date:  2014-08-19

5.  Orientation of tie-lines in the phase diagram of DOPC/DPPC/cholesterol model biomembranes.

Authors:  Pradeep Uppamoochikkal; Stephanie Tristram-Nagle; John F Nagle
Journal:  Langmuir       Date:  2010-10-22       Impact factor: 3.882

6.  HIV-1 matrix-31 membrane binding peptide interacts differently with membranes containing PS vs. PI(4,5)P2.

Authors:  Lauren O'Neil; Kathryn Andenoro; Isabella Pagano; Laura Carroll; Leah Langer; Zachary Dell; Davina Perera; Bradley W Treece; Frank Heinrich; Mathias Lösche; John F Nagle; Stephanie Tristram-Nagle
Journal:  Biochim Biophys Acta       Date:  2016-09-15

7.  Elastic behavior of model membranes with antimicrobial peptides depends on lipid specificity and d-enantiomers.

Authors:  Akari Kumagai; Fernando G Dupuy; Zoran Arsov; Yasmene Elhady; Diamond Moody; Robert K Ernst; Berthony Deslouches; Ronald C Montelaro; Y Peter Di; Stephanie Tristram-Nagle
Journal:  Soft Matter       Date:  2019-02-20       Impact factor: 3.679

8.  Structural determinants of water permeability through the lipid membrane.

Authors:  John C Mathai; Stephanie Tristram-Nagle; John F Nagle; Mark L Zeidel
Journal:  J Gen Physiol       Date:  2008-01       Impact factor: 4.086

9.  Alamethicin aggregation in lipid membranes.

Authors:  Jianjun Pan; Stephanie Tristram-Nagle; John F Nagle
Journal:  J Membr Biol       Date:  2009-09-30       Impact factor: 1.843

10.  What are the true values of the bending modulus of simple lipid bilayers?

Authors:  John F Nagle; Michael S Jablin; Stephanie Tristram-Nagle; Kiyotaka Akabori
Journal:  Chem Phys Lipids       Date:  2014-04-16       Impact factor: 3.329

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