Literature DB >> 17951429

Chemical evolution: the mechanism of the formation of adenine under prebiotic conditions.

Debjani Roy1, Katayoun Najafian, Paul von Ragué Schleyer.   

Abstract

Fundamental building blocks of life have been detected extraterrestrially, even in interstellar space, and are known to form nonenzymatically. Thus, the HCN pentamer, adenine (a base present in DNA and RNA), was first isolated in abiogenic experiments from an aqueous solution of ammonia and HCN in 1960. Although many variations of the reaction conditions giving adenine have been reported since then, the mechanistic details remain unexplored. Our predictions are based on extensive computations of sequences of reaction steps along several possible mechanistic routes. H(2)O- or NH(3)-catalyzed pathways are more favorable than uncatalyzed neutral or anionic alternatives, and they may well have been the major source of adenine on primitive earth. Our report provides a more detailed understanding of some of the chemical processes involved in chemical evolution, and a partial answer to the fundamental question of molecular biogenesis. Our investigation should trigger similar explorations of the detailed mechanisms of the abiotic formation of the remaining nucleic acid bases and other biologically relevant molecules.

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Year:  2007        PMID: 17951429      PMCID: PMC2077245          DOI: 10.1073/pnas.0708434104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Prebiotic synthesis of adenine and amino acids under Europa-like conditions.

Authors:  M Levy; S L Miller; K Brinton; J L Bada
Journal:  Icarus       Date:  2000-06       Impact factor: 3.508

2.  Tautomeric equilibria of pyridoxal-5'-phosphate (vitamin B6) and 3-hydroxypyridine derivatives: a theoretical study of solvation effects.

Authors:  G S M Kiruba; Ming Wah Wong
Journal:  J Org Chem       Date:  2003-04-04       Impact factor: 4.354

3.  Chemical events on the primitive Earth.

Authors:  P H Abelson
Journal:  Proc Natl Acad Sci U S A       Date:  1966-06       Impact factor: 11.205

4.  Why urea eliminates ammonia rather than hydrolyzes in aqueous solution.

Authors:  Anastassia N Alexandrova; William L Jorgensen
Journal:  J Phys Chem B       Date:  2007-02-01       Impact factor: 2.991

5.  An investigation of prebiotic purine synthesis from the hydrolysis of HCN polymers.

Authors:  Eduardo Borquez; H James Cleaves; Antonio Lazcano; Stanley L Miller
Journal:  Orig Life Evol Biosph       Date:  2005-04       Impact factor: 1.950

6.  Studies in prebiotic synthesis. 3. Synthesis of pyrimidines from cyanoacetylene and cyanate.

Authors:  J P Ferris; R A Sanchez; L E Orgel
Journal:  J Mol Biol       Date:  1968-05-14       Impact factor: 5.469

7.  Aminomalononitrile and 4-amino-5-cyanoimidazole in hydrogen cyanide polymerization and adenine synthesis.

Authors:  J P Ferris; L E Orgel
Journal:  J Am Chem Soc       Date:  1965-11-05       Impact factor: 15.419

8.  Studies on prebiotic synthesis. I. Aminomalononitrile and 4-amino-5-cyanoimidazole.

Authors:  J P Ferris; L E Orgel
Journal:  J Am Chem Soc       Date:  1966-08-20       Impact factor: 15.419

Review 9.  Prebiotic chemistry and the origin of the RNA world.

Authors:  Leslie E Orgel
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 Mar-Apr       Impact factor: 8.250

10.  Adenine synthesis in interstellar space: mechanisms of prebiotic pyrimidine-ring formation of monocyclic HCN-pentamers.

Authors:  Rainer Glaser; Brian Hodgen; Dean Farrelly; Elliot McKee
Journal:  Astrobiology       Date:  2007-06       Impact factor: 4.335

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  13 in total

1.  Meteorite-catalyzed syntheses of nucleosides and of other prebiotic compounds from formamide under proton irradiation.

Authors:  Raffaele Saladino; Eleonora Carota; Giorgia Botta; Mikhail Kapralov; Gennady N Timoshenko; Alexei Y Rozanov; Eugene Krasavin; Ernesto Di Mauro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-13       Impact factor: 11.205

Review 2.  Did Cyclic Metaphosphates Have a Role in the Origin of Life?

Authors:  Thomas Glonek
Journal:  Orig Life Evol Biosph       Date:  2021-03-15       Impact factor: 1.950

3.  Mechanisms of the Formation of Adenine, Guanine, and Their Analogues in UV-Irradiated Mixed NH3:H2O Molecular Ices Containing Purine.

Authors:  Partha P Bera; Tamar Stein; Martin Head-Gordon; Timothy J Lee
Journal:  Astrobiology       Date:  2017-07-14       Impact factor: 4.335

4.  The Dissipative Photochemical Origin of Life: UVC Abiogenesis of Adenine.

Authors:  Karo Michaelian
Journal:  Entropy (Basel)       Date:  2021-02-10       Impact factor: 2.524

Review 5.  Photosynthesis and photo-stability of nucleic acids in prebiotic extraterrestrial environments.

Authors:  Scott A Sandford; Partha P Bera; Timothy J Lee; Christopher K Materese; Michel Nuevo
Journal:  Top Curr Chem       Date:  2015

6.  Benchmark, DFT assessments, cooperativity, and energy decomposition analysis of the hydrogen bonds in HCN/HNC oligomeric complexes.

Authors:  Paulo McMiller C de Oliveira; Juliana A B Silva; Ricardo L Longo
Journal:  J Mol Model       Date:  2017-02-04       Impact factor: 1.810

7.  Salinity Effects on the Adsorption of Nucleic Acid Compounds on Na-Montmorillonite: a Prebiotic Chemistry Experiment.

Authors:  Saúl A Villafañe-Barajas; João Paulo T Baú; María Colín-García; Alicia Negrón-Mendoza; Alejandro Heredia-Barbero; Teresa Pi-Puig; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2018-02-01       Impact factor: 1.950

Review 8.  Elementary reactions and their role in gas-phase prebiotic chemistry.

Authors:  Nadia Balucani
Journal:  Int J Mol Sci       Date:  2009-05-19       Impact factor: 6.208

9.  An Interpretation of the Ancestral Codon from Miller's Amino Acids and Nucleotide Correlations in Modern Coding Sequences.

Authors:  Nicolas Carels; Miguel Ponce de Leon
Journal:  Bioinform Biol Insights       Date:  2015-04-15

10.  Microscopic dissipative structuring and proliferation at the origin of life.

Authors:  Karo Michaelian
Journal:  Heliyon       Date:  2017-10-13
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