Literature DB >> 33721178

Did Cyclic Metaphosphates Have a Role in the Origin of Life?

Thomas Glonek1.   

Abstract

How life began still eludes science life, the initial progenote in the context presented herein, being a chemical aggregate of primordial inorganic and organic molecules capable of self-replication and evolution into ever increasingly complex forms and functions.Presented is a hypothesis that a mineral scaffold generated by geological processes and containing polymerized phosphate units was present in primordial seas that provided the initiating factor responsible for the sequestration and organization of primordial life's constituents. Unlike previous hypotheses proposing phosphates as the essential initiating factor, the key phosphate described here is not a polynucleotide or just any condensed phosphate but a large (in the range of at least 1 kilo-phosphate subunits), water soluble, cyclic metaphosphate, which is a closed loop chain of polymerized inorganic phosphate residues containing only phosphate middle groups. The chain forms an intrinsic 4-phosphate helix analogous to its structure in Na Kurrol's salt, and as with DNA, very large metaphosphates may fold into hairpin structures. Using a Holliday-junction-like scrambling mechanism, also analogous to DNA, rings may be manipulated (increased, decreased, exchanged) easily with little to no need for additional energy, the reaction being essentially an isomerization.A literature review is presented describing findings that support the above hypothesis. Reviewed is condensed phosphate inorganic chemistry including its geological origins, biological occurrence, enzymes and their genetics through eukaryotes, polyphosphate functions, circular polynucleotides and the role of the Holliday junction, previous biogenesis hypotheses, and an Eoarchean Era timeline.

Entities:  

Keywords:  Holliday; LUCA; Metaphosphate; Origin of life; Polyphosphate; Progenote

Year:  2021        PMID: 33721178     DOI: 10.1007/s11084-021-09604-5

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  107 in total

1.  THE FORMATION OF CONDENSED PHOSPHATE IN AQUEOUS SOLUTION.

Authors:  A Beck; L E Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  1965-09       Impact factor: 11.205

2.  Planetary science: Prebiotic chemistry on the rocks.

Authors:  Geoffrey A Blake; Edwin A Bergin
Journal:  Nature       Date:  2015-04-09       Impact factor: 49.962

3.  Lunar formation. Dating the Moon-forming impact event with asteroidal meteorites.

Authors:  W F Bottke; D Vokrouhlický; S Marchi; T Swindle; E R D Scott; J R Weirich; H Levison
Journal:  Science       Date:  2015-04-17       Impact factor: 47.728

4.  The rise of algae in Cryogenian oceans and the emergence of animals.

Authors:  Jochen J Brocks; Amber J M Jarrett; Eva Sirantoine; Christian Hallmann; Yosuke Hoshino; Tharika Liyanage
Journal:  Nature       Date:  2017-08-16       Impact factor: 49.962

Review 5.  Inorganic polyphosphate in the origin and survival of species.

Authors:  Michael R W Brown; Arthur Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-01       Impact factor: 11.205

6.  Polyphosphate kinase from Escherichia coli. Purification and demonstration of a phosphoenzyme intermediate.

Authors:  K Ahn; A Kornberg
Journal:  J Biol Chem       Date:  1990-07-15       Impact factor: 5.157

7.  Novel assay reveals multiple pathways regulating stress-induced accumulations of inorganic polyphosphate in Escherichia coli.

Authors:  D Ault-Riché; C D Fraley; C M Tzeng; A Kornberg
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

8.  Restriction analysis of chromosomal sequences homologous to single-copy fragments cloned from small polydisperse circular DNA (spcDNA).

Authors:  G Assum; B Böckle; T Fink; U Dmochewitz; W Krone
Journal:  Hum Genet       Date:  1989-06       Impact factor: 4.132

9.  Properties of polyphosphate: AMP phosphotransferase of Acinetobacter strain 210A.

Authors:  C F Bonting; G J Kortstee; A J Zehnder
Journal:  J Bacteriol       Date:  1991-10       Impact factor: 3.490

10.  An exopolyphosphatase of Escherichia coli. The enzyme and its ppx gene in a polyphosphate operon.

Authors:  M Akiyama; E Crooke; A Kornberg
Journal:  J Biol Chem       Date:  1993-01-05       Impact factor: 5.157

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  2 in total

1.  Biomimetic Polyphosphate Materials: Toward Application in Regenerative Medicine.

Authors:  Heinz C Schröder; Xiaohong Wang; Meik Neufurth; Shunfeng Wang; Werner E G Müller
Journal:  Prog Mol Subcell Biol       Date:  2022

Review 2.  Prebiotic Chemistry: The Role of Trimetaphosphate in Prebiotic Chemical Evolution.

Authors:  Dingwei Gan; Jianxi Ying; Yufen Zhao
Journal:  Front Chem       Date:  2022-07-13       Impact factor: 5.545

  2 in total

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