Literature DB >> 17947119

Image analysis for neuroblastoma classification: segmentation of cell nuclei.

Metin N Gurcan1, Tony Pan, Hiro Shimada, Joel Saltz.   

Abstract

Neuroblastoma is a childhood cancer of the nervous system. Current prognostic classification of this disease partly relies on morphological characteristics of the cells from H&E-stained images. In this work, an automated cell nuclei segmentation method is developed. This method employs morphological top-hat by reconstruction algorithm coupled with hysteresis thresholding to both detect and segment the cell nuclei. Accuracy of the automated cell nuclei segmentation algorithm is measured by comparing its outputs to manual segmentation. The average segmentation accuracy is 90.24+/-5.14%

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Year:  2006        PMID: 17947119     DOI: 10.1109/IEMBS.2006.260837

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  21 in total

1.  Evaluation of nucleus segmentation in digital pathology images through large scale image synthesis.

Authors:  Naiyun Zhou; Xiaxia Yu; Tianhao Zhao; Si Wen; Fusheng Wang; Wei Zhu; Tahsin Kurc; Allen Tannenbaum; Joel Saltz; Yi Gao
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-03-01

Review 2.  Histopathological image analysis: a review.

Authors:  Metin N Gurcan; Laura E Boucheron; Ali Can; Anant Madabhushi; Nasir M Rajpoot; B Yener
Journal:  IEEE Rev Biomed Eng       Date:  2009-10-30

3.  Histology image analysis for carcinoma detection and grading.

Authors:  Lei He; L Rodney Long; Sameer Antani; George R Thoma
Journal:  Comput Methods Programs Biomed       Date:  2012-03-20       Impact factor: 5.428

Review 4.  An Assessment of Imaging Informatics for Precision Medicine in Cancer.

Authors:  C Chennubhotla; L P Clarke; A Fedorov; D Foran; G Harris; E Helton; R Nordstrom; F Prior; D Rubin; J H Saltz; E Shalley; A Sharma
Journal:  Yearb Med Inform       Date:  2017-09-11

5.  Region Templates: Data Representation and Management for High-Throughput Image Analysis.

Authors:  George Teodoro; Tony Pan; Tahsin Kurc; Jun Kong; Lee Cooper; Scott Klasky; Joel Saltz
Journal:  Parallel Comput       Date:  2014-12-01       Impact factor: 0.986

6.  A Containerized Software System for Generation, Management, and Exploration of Features from Whole Slide Tissue Images.

Authors:  Joel Saltz; Ashish Sharma; Ganesh Iyer; Erich Bremer; Feiqiao Wang; Alina Jasniewski; Tammy DiPrima; Jonas S Almeida; Yi Gao; Tianhao Zhao; Mary Saltz; Tahsin Kurc
Journal:  Cancer Res       Date:  2017-11-01       Impact factor: 12.701

7.  Computer-aided Prognosis of Neuroblastoma on Whole-slide Images: Classification of Stromal Development.

Authors:  O Sertel; J Kong; H Shimada; U V Catalyurek; J H Saltz; M N Gurcan
Journal:  Pattern Recognit       Date:  2009-06       Impact factor: 7.740

8.  A Multi-Classifier System for Automatic Mitosis Detection in Breast Histopathology Images Using Deep Belief Networks.

Authors:  K Sabeena Beevi; Madhu S Nair; G R Bindu
Journal:  IEEE J Transl Eng Health Med       Date:  2017-04-25       Impact factor: 3.316

9.  Whole slide image cytometry: a novel method to detect abnormal DNA content in Barrett's esophagus.

Authors:  Yinhai Wang; Damian T McManus; Kenneth Arthur; Brian T Johnston; Andrew J Kennedy; Helen G Coleman; Liam J Murray; Peter W Hamilton
Journal:  Lab Invest       Date:  2015-08-03       Impact factor: 5.662

10.  Computer-aided diagnostics in digital pathology: automated evaluation of early-phase pancreatic cancer in mice.

Authors:  Leeor Langer; Yoav Binenbaum; Leonid Gugel; Moran Amit; Ziv Gil; Shai Dekel
Journal:  Int J Comput Assist Radiol Surg       Date:  2014-10-30       Impact factor: 2.924

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