Literature DB >> 17885136

Draft genome of the filarial nematode parasite Brugia malayi.

Elodie Ghedin1, Shiliang Wang, David Spiro, Elisabet Caler, Qi Zhao, Jonathan Crabtree, Jonathan E Allen, Arthur L Delcher, David B Guiliano, Diego Miranda-Saavedra, Samuel V Angiuoli, Todd Creasy, Paolo Amedeo, Brian Haas, Najib M El-Sayed, Jennifer R Wortman, Tamara Feldblyum, Luke Tallon, Michael Schatz, Martin Shumway, Hean Koo, Steven L Salzberg, Seth Schobel, Mihaela Pertea, Mihai Pop, Owen White, Geoffrey J Barton, Clotilde K S Carlow, Michael J Crawford, Jennifer Daub, Matthew W Dimmic, Chris F Estes, Jeremy M Foster, Mehul Ganatra, William F Gregory, Nicholas M Johnson, Jinming Jin, Richard Komuniecki, Ian Korf, Sanjay Kumar, Sandra Laney, Ben-Wen Li, Wen Li, Tim H Lindblom, Sara Lustigman, Dong Ma, Claude V Maina, David M A Martin, James P McCarter, Larry McReynolds, Makedonka Mitreva, Thomas B Nutman, John Parkinson, José M Peregrín-Alvarez, Catherine Poole, Qinghu Ren, Lori Saunders, Ann E Sluder, Katherine Smith, Mario Stanke, Thomas R Unnasch, Jenna Ware, Aguan D Wei, Gary Weil, Deryck J Williams, Yinhua Zhang, Steven A Williams, Claire Fraser-Liggett, Barton Slatko, Mark L Blaxter, Alan L Scott.   

Abstract

Parasitic nematodes that cause elephantiasis and river blindness threaten hundreds of millions of people in the developing world. We have sequenced the approximately 90 megabase (Mb) genome of the human filarial parasite Brugia malayi and predict approximately 11,500 protein coding genes in 71 Mb of robustly assembled sequence. Comparative analysis with the free-living, model nematode Caenorhabditis elegans revealed that, despite these genes having maintained little conservation of local synteny during approximately 350 million years of evolution, they largely remain in linkage on chromosomal units. More than 100 conserved operons were identified. Analysis of the predicted proteome provides evidence for adaptations of B. malayi to niches in its human and vector hosts and insights into the molecular basis of a mutualistic relationship with its Wolbachia endosymbiont. These findings offer a foundation for rational drug design.

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Year:  2007        PMID: 17885136      PMCID: PMC2613796          DOI: 10.1126/science.1145406

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  28 in total

1.  Use of RNA interference to investigate gene function in the human filarial nematode parasite Brugia malayi.

Authors:  A Aziz Aboobaker; Mark L Blaxter
Journal:  Mol Biochem Parasitol       Date:  2003-06       Impact factor: 1.759

2.  Expression and immune recognition of Brugia malayi VAL-1, a homologue of vespid venom allergens and Ancylostoma secreted proteins.

Authors:  J Murray; W F Gregory; N Gomez-Escobar; A K Atmadja; R M Maizels
Journal:  Mol Biochem Parasitol       Date:  2001-11       Impact factor: 1.759

3.  Systemic RNAi in C. elegans requires the putative transmembrane protein SID-1.

Authors:  William M Winston; Christina Molodowitch; Craig P Hunter
Journal:  Science       Date:  2002-02-07       Impact factor: 47.728

4.  Limited microsynteny between the genomes of Pristionchus pacificus and Caenorhabditis elegans.

Authors:  Kwang-Zin Lee; Andreas Eizinger; Ramkumar Nandakumar; Stephan C Schuster; Ralf J Sommer
Journal:  Nucleic Acids Res       Date:  2003-05-15       Impact factor: 16.971

Review 5.  Nematoda: genes, genomes and the evolution of parasitism.

Authors:  Mark L Blaxter
Journal:  Adv Parasitol       Date:  2003       Impact factor: 3.870

6.  A map of the interactome network of the metazoan C. elegans.

Authors:  Siming Li; Christopher M Armstrong; Nicolas Bertin; Hui Ge; Stuart Milstein; Mike Boxem; Pierre-Olivier Vidalain; Jing-Dong J Han; Alban Chesneau; Tong Hao; Debra S Goldberg; Ning Li; Monica Martinez; Jean-François Rual; Philippe Lamesch; Lai Xu; Muneesh Tewari; Sharyl L Wong; Lan V Zhang; Gabriel F Berriz; Laurent Jacotot; Philippe Vaglio; Jérôme Reboul; Tomoko Hirozane-Kishikawa; Qianru Li; Harrison W Gabel; Ahmed Elewa; Bridget Baumgartner; Debra J Rose; Haiyuan Yu; Stephanie Bosak; Reynaldo Sequerra; Andrew Fraser; Susan E Mango; William M Saxton; Susan Strome; Sander Van Den Heuvel; Fabio Piano; Jean Vandenhaute; Claude Sardet; Mark Gerstein; Lynn Doucette-Stamm; Kristin C Gunsalus; J Wade Harper; Michael E Cusick; Frederick P Roth; David E Hill; Marc Vidal
Journal:  Science       Date:  2004-01-02       Impact factor: 47.728

7.  Functional genomic analysis of C. elegans molting.

Authors:  Alison R Frand; Sascha Russel; Gary Ruvkun
Journal:  PLoS Biol       Date:  2005-08-30       Impact factor: 8.029

8.  Operon conservation and the evolution of trans-splicing in the phylum Nematoda.

Authors:  David B Guiliano; Mark L Blaxter
Journal:  PLoS Genet       Date:  2006-10-09       Impact factor: 5.917

9.  Conservation of long-range synteny and microsynteny between the genomes of two distantly related nematodes.

Authors:  D B Guiliano; N Hall; S J M Jones; L N Clark; C H Corton; B G Barrell; M L Blaxter
Journal:  Genome Biol       Date:  2002-09-26       Impact factor: 13.583

10.  Specificity and complexity of the Caenorhabditis elegans innate immune response.

Authors:  Scott Alper; Sandra J McBride; Brad Lackford; Jonathan H Freedman; David A Schwartz
Journal:  Mol Cell Biol       Date:  2007-05-25       Impact factor: 4.272

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  309 in total

1.  Molecular expression and characterization of a novel protein phosphatase 2A gene from Clonorchis sinensis.

Authors:  Chuanhuan Deng; Xinbing Yu; Xuerong Li; Jiufeng Sun; Lexun Wang; Xiaoyun Wang; Wenjun Chen; Xiaoli Lv; Xuchu Hu; Zhongdao Wu; Chi Liang; Jin Xu
Journal:  Parasitol Res       Date:  2011-12-14       Impact factor: 2.289

2.  Bioinformatic analysis of P granule-related proteins: insights into germ granule evolution in nematodes.

Authors:  Luis A Bezares-Calderón; Arturo Becerra; Laura S Salinas; Ernesto Maldonado; Rosa E Navarro
Journal:  Dev Genes Evol       Date:  2010-06-08       Impact factor: 0.900

3.  ATP synthesis-coupled and -uncoupled acetate production from acetyl-CoA by mitochondrial acetate:succinate CoA-transferase and acetyl-CoA thioesterase in Trypanosoma.

Authors:  Yoann Millerioux; Pauline Morand; Marc Biran; Muriel Mazet; Patrick Moreau; Marion Wargnies; Charles Ebikeme; Kamel Deramchia; Lara Gales; Jean-Charles Portais; Michael Boshart; Jean-Michel Franconi; Frédéric Bringaud
Journal:  J Biol Chem       Date:  2012-04-02       Impact factor: 5.157

4.  Ivermectin disrupts the function of the excretory-secretory apparatus in microfilariae of Brugia malayi.

Authors:  Yovany Moreno; Joseph F Nabhan; Jonathan Solomon; Charles D Mackenzie; Timothy G Geary
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

5.  Discovery of Specific Antigens That Can Predict Microfilarial Intensity in Loa loa Infection.

Authors:  Papa M Drame; Sasisekhar Bennuru; Thomas B Nutman
Journal:  J Clin Microbiol       Date:  2017-06-21       Impact factor: 5.948

6.  Comparative bioinformatics, temporal and spatial expression analyses of Ixodes scapularis organic anion transporting polypeptides.

Authors:  Zeljko Radulović; Lindsay M Porter; Tae K Kim; Albert Mulenga
Journal:  Ticks Tick Borne Dis       Date:  2014-02-25       Impact factor: 3.744

7.  Immunoprophylaxis of multi-antigen peptide (MAP) vaccine for human lymphatic filariasis.

Authors:  Christiana Immanuel; Aparnaa Ramanathan; Malathi Balasubramaniyan; Vishal Kishor Khatri; Nitin Purushottam Amdare; Donthamsetty Nageswara Rao; Maryada Venkata Rami Reddy; Kaliraj Perumal
Journal:  Immunol Res       Date:  2017-06       Impact factor: 2.829

8.  Discovery of a Stress-Activated Protein Kinase Inhibitor for Lymphatic Filariasis.

Authors:  Sreedhar R Tummalapalli; Rohit Bhat; Agnieszka Chojnowski; Monika Prorok; Tamara Kreiss; Ronald Goldberg; Stacie Canan; Natalie Hawryluk; Deborah Mortensen; Vikram Khetani; Jerome Zeldis; John J Siekierka; David P Rotella
Journal:  ACS Med Chem Lett       Date:  2018-02-09       Impact factor: 4.345

Review 9.  The genome of Brugia malayi - all worms are not created equal.

Authors:  Alan L Scott; Elodie Ghedin
Journal:  Parasitol Int       Date:  2008-09-24       Impact factor: 2.230

Review 10.  Helminth infections: the great neglected tropical diseases.

Authors:  Peter J Hotez; Paul J Brindley; Jeffrey M Bethony; Charles H King; Edward J Pearce; Julie Jacobson
Journal:  J Clin Invest       Date:  2008-04       Impact factor: 14.808

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