Literature DB >> 24582512

Comparative bioinformatics, temporal and spatial expression analyses of Ixodes scapularis organic anion transporting polypeptides.

Zeljko Radulović1, Lindsay M Porter1, Tae K Kim1, Albert Mulenga2.   

Abstract

Organic anion-transporting polypeptides (Oatps) are an integral part of the detoxification mechanism in vertebrates and invertebrates. These cell surface proteins are involved in mediating the sodium-independent uptake and/or distribution of a broad array of organic amphipathic compounds and xenobiotic drugs. This study describes bioinformatics and biological characterization of 9 Oatp sequences in the Ixodes scapularis genome. These sequences have been annotated on the basis of 12 transmembrane domains, consensus motif D-X-RW-(I,V)-GAWW-X-G-(F,L)-L, and 11 conserved cysteine amino acid residues in the large extracellular loop 5 that characterize the Oatp superfamily. Ixodes scapularis Oatps may regulate non-redundant cross-tick species conserved functions in that they did not cluster as a monolithic group on the phylogeny tree and that they have orthologs in other ticks. Phylogeny clustering patterns also suggest that some tick Oatp sequences transport substrates that are similar to those of body louse, mosquito, eye worm, and filarial worm Oatps. Semi-quantitative RT-PCR analysis demonstrated that all 9 I. scapularis Oatp sequences were expressed during tick feeding. Ixodes scapularis Oatp genes potentially regulate functions during early and/or late-stage tick feeding as revealed by normalized mRNA profiles. Normalized transcript abundance indicates that I. scapularis Oatp genes are strongly expressed in unfed ticks during the first 24h of feeding and/or at the end of the tick feeding process. Except for 2 I. scapularis Oatps, which were expressed in the salivary glands and ovaries, all other genes were expressed in all tested organs, suggesting the significance of I. scapularis Oatps in maintaining tick homeostasis. Different I. scapularis Oatp mRNA expression patterns were detected and discussed with reference to different physiological states of unfed and feeding ticks.
Copyright © 2014 Elsevier GmbH. All rights reserved.

Entities:  

Keywords:  Expression analyses; Ixodes scapularis; Organic anion transporting polypeptides

Mesh:

Substances:

Year:  2014        PMID: 24582512      PMCID: PMC4432481          DOI: 10.1016/j.ttbdis.2013.12.002

Source DB:  PubMed          Journal:  Ticks Tick Borne Dis        ISSN: 1877-959X            Impact factor:   3.744


  69 in total

1.  Molecular characterization and functional regulation of a novel rat liver-specific organic anion transporter rlst-1.

Authors:  M Kakyo; M Unno; T Tokui; R Nakagomi; T Nishio; H Iwasashi; D Nakai; M Seki; M Suzuki; T Naitoh; S Matsuno; H Yawo; T Abe
Journal:  Gastroenterology       Date:  1999-10       Impact factor: 22.682

2.  Molecular identification of a rat novel organic anion transporter moat1, which transports prostaglandin D(2), leukotriene C(4), and taurocholate.

Authors:  T Nishio; H Adachi; R Nakagomi; T Tokui; E Sato; M Tanemoto; K Fujiwara; M Okabe; T Onogawa; T Suzuki; D Nakai; K Shiiba; M Suzuki; H Ohtani; Y Kondo; M Unno; S Ito; K Iinuma; K Nunoki; S Matsuno; T Abe
Journal:  Biochem Biophys Res Commun       Date:  2000-09-07       Impact factor: 3.575

3.  Evaluation of endogenous reference genes for real-time PCR quantification of gene expression in Ancylostoma caninum.

Authors:  Shweta Trivedi; Prema Arasu
Journal:  Mol Biochem Parasitol       Date:  2005-10       Impact factor: 1.759

Review 4.  Pharmacogenomics of human OATP transporters.

Authors:  Jörg König; Annick Seithel; Ulrike Gradhand; Martin F Fromm
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2006-03-09       Impact factor: 3.000

5.  Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.

Authors:  Robert L Strausberg; Elise A Feingold; Lynette H Grouse; Jeffery G Derge; Richard D Klausner; Francis S Collins; Lukas Wagner; Carolyn M Shenmen; Gregory D Schuler; Stephen F Altschul; Barry Zeeberg; Kenneth H Buetow; Carl F Schaefer; Narayan K Bhat; Ralph F Hopkins; Heather Jordan; Troy Moore; Steve I Max; Jun Wang; Florence Hsieh; Luda Diatchenko; Kate Marusina; Andrew A Farmer; Gerald M Rubin; Ling Hong; Mark Stapleton; M Bento Soares; Maria F Bonaldo; Tom L Casavant; Todd E Scheetz; Michael J Brownstein; Ted B Usdin; Shiraki Toshiyuki; Piero Carninci; Christa Prange; Sam S Raha; Naomi A Loquellano; Garrick J Peters; Rick D Abramson; Sara J Mullahy; Stephanie A Bosak; Paul J McEwan; Kevin J McKernan; Joel A Malek; Preethi H Gunaratne; Stephen Richards; Kim C Worley; Sarah Hale; Angela M Garcia; Laura J Gay; Stephen W Hulyk; Debbie K Villalon; Donna M Muzny; Erica J Sodergren; Xiuhua Lu; Richard A Gibbs; Jessica Fahey; Erin Helton; Mark Ketteman; Anuradha Madan; Stephanie Rodrigues; Amy Sanchez; Michelle Whiting; Anup Madan; Alice C Young; Yuriy Shevchenko; Gerard G Bouffard; Robert W Blakesley; Jeffrey W Touchman; Eric D Green; Mark C Dickson; Alex C Rodriguez; Jane Grimwood; Jeremy Schmutz; Richard M Myers; Yaron S N Butterfield; Martin I Krzywinski; Ursula Skalska; Duane E Smailus; Angelique Schnerch; Jacqueline E Schein; Steven J M Jones; Marco A Marra
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

6.  Molecular identification and characterization of novel members of the human organic anion transporter (OATP) family.

Authors:  I Tamai; J Nezu; H Uchino; Y Sai; A Oku; M Shimane; A Tsuji
Journal:  Biochem Biophys Res Commun       Date:  2000-06-24       Impact factor: 3.575

7.  Expression cloning of a rat liver Na(+)-independent organic anion transporter.

Authors:  E Jacquemin; B Hagenbuch; B Stieger; A W Wolkoff; P J Meier
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-04       Impact factor: 11.205

8.  Evidence of evolutionary conservation of function between the thyroxine transporter Oatp1c1 and major facilitator superfamily members.

Authors:  Daniel E Westholm; Jacob D Marold; Kevin J Viken; Alicia H Duerst; Grant W Anderson; Jon N Rumbley
Journal:  Endocrinology       Date:  2010-09-29       Impact factor: 4.736

9.  Tick genomics: the Ixodes genome project and beyond.

Authors:  J Pagel Van Zee; N S Geraci; F D Guerrero; S K Wikel; J J Stuart; V M Nene; C A Hill
Journal:  Int J Parasitol       Date:  2007-06-09       Impact factor: 3.981

10.  Evidence of Babesia microti infection in multi-infected Ixodes persulcatus ticks in Russia.

Authors:  Andrey N Alekseev; Aleksander V Semenov; Helen V Dubinina
Journal:  Exp Appl Acarol       Date:  2003       Impact factor: 2.380

View more
  9 in total

1.  Characterization of AV422 from Haemaphysalis flava ticks in vitro.

Authors:  Lei Liu; Hao Tang; De-Yong Duan; Jin-Bao Liu; Jie Wang; Li-Li Feng; Tian-Yin Cheng
Journal:  Exp Appl Acarol       Date:  2021-07-23       Impact factor: 2.132

2.  A repertoire of protease inhibitor families in Amblyomma americanum and other tick species: inter-species comparative analyses.

Authors:  Lindsay M Porter; Željko M Radulović; Albert Mulenga
Journal:  Parasit Vectors       Date:  2017-03-22       Impact factor: 3.876

3.  Human rickettsial pathogen modulates arthropod organic anion transporting polypeptide and tryptophan pathway for its survival in ticks.

Authors:  Vikas Taank; Shovan Dutta; Amrita Dasgupta; Tanner K Steeves; Durland Fish; John F Anderson; Hameeda Sultana; Girish Neelakanta
Journal:  Sci Rep       Date:  2017-10-16       Impact factor: 4.379

4.  Repression of tick microRNA-133 induces organic anion transporting polypeptide expression critical for Anaplasma phagocytophilum survival in the vector and transmission to the vertebrate host.

Authors:  Ellango Ramasamy; Vikas Taank; John F Anderson; Hameeda Sultana; Girish Neelakanta
Journal:  PLoS Genet       Date:  2020-07-02       Impact factor: 5.917

5.  Characterization of tick organic anion transporting polypeptides (OATPs) upon bacterial and viral infections.

Authors:  Vikas Taank; Wenshuo Zhou; Xuran Zhuang; John F Anderson; Utpal Pal; Hameeda Sultana; Girish Neelakanta
Journal:  Parasit Vectors       Date:  2018-11-14       Impact factor: 3.876

6.  Effect of Chemical Surface Texturing on the Superhydrophobic Behavior of Micro-Nano-Roughened AA6082 Surfaces.

Authors:  Amani Khaskhoussi; Luigi Calabrese; Salvatore Patané; Edoardo Proverbio
Journal:  Materials (Basel)       Date:  2021-11-24       Impact factor: 3.623

Review 7.  Tick Saliva and Salivary Glands: What Do We Know So Far on Their Role in Arthropod Blood Feeding and Pathogen Transmission.

Authors:  Girish Neelakanta; Hameeda Sultana
Journal:  Front Cell Infect Microbiol       Date:  2022-01-19       Impact factor: 6.073

8.  Heat Stability and Icing Delay on Superhydrophobic Coatings in Facile One Step.

Authors:  Jingyu Shang; Yongfeng Jiang; Wenhua Wang
Journal:  Polymers (Basel)       Date:  2022-07-31       Impact factor: 4.967

9.  First draft genome for the sand-hopper Trinorchestia longiramus.

Authors:  Ajit Kumar Patra; Oksung Chung; Ji Yong Yoo; Min Seop Kim; Moon Geun Yoon; Jeong-Hyeon Choi; Youngik Yang
Journal:  Sci Data       Date:  2020-03-09       Impact factor: 6.444

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.