Literature DB >> 17852750

Estimating sparse spectro-temporal receptive fields with natural stimuli.

Stephen V David1, Nima Mesgarani, Shihab A Shamma.   

Abstract

Several algorithms have been proposed to characterize the spectro-temporal tuning properties of auditory neurons during the presentation of natural stimuli. Algorithms designed to work at realistic signal-to-noise levels must make some prior assumptions about tuning in order to produce accurate fits, and these priors can introduce bias into estimates of tuning. We compare a new, computationally efficient algorithm for estimating tuning properties, boosting, to a more commonly used algorithm, normalized reverse correlation. These algorithms employ the same functional model and cost function, differing only in their priors. We use both algorithms to estimate spectro-temporal tuning properties of neurons in primary auditory cortex during the presentation of continuous human speech. Models estimated using either algorithm, have similar predictive power, although fits by boosting are slightly more accurate. More strikingly, neurons characterized with boosting appear tuned to narrower spectral bandwidths and higher temporal modulation rates than when characterized with normalized reverse correlation. These differences have little impact on responses to speech, which is spectrally broadband and modulated at low rates. However, we find that models estimated by boosting also predict responses to non-speech stimuli more accurately. These findings highlight the crucial role of priors in characterizing neuronal response properties with natural stimuli.

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Year:  2007        PMID: 17852750     DOI: 10.1080/09548980701609235

Source DB:  PubMed          Journal:  Network        ISSN: 0954-898X            Impact factor:   1.273


  67 in total

1.  Inferring the role of inhibition in auditory processing of complex natural stimuli.

Authors:  Nadja Schinkel-Bielefeld; Stephen V David; Shihab A Shamma; Daniel A Butts
Journal:  J Neurophysiol       Date:  2012-03-28       Impact factor: 2.714

2.  Neuron-specific stimulus masking reveals interference in spike timing at the cortical level.

Authors:  Eric Larson; Ross K Maddox; Ben P Perrone; Kamal Sen; Cyrus P Billimoria
Journal:  J Assoc Res Otolaryngol       Date:  2011-10-01

3.  Neural coding of continuous speech in auditory cortex during monaural and dichotic listening.

Authors:  Nai Ding; Jonathan Z Simon
Journal:  J Neurophysiol       Date:  2011-10-05       Impact factor: 2.714

4.  Automating the design of informative sequences of sensory stimuli.

Authors:  Jeremy Lewi; David M Schneider; Sarah M N Woolley; Liam Paninski
Journal:  J Comput Neurosci       Date:  2010-06-16       Impact factor: 1.621

5.  Rapid Transformation from Auditory to Linguistic Representations of Continuous Speech.

Authors:  Christian Brodbeck; L Elliot Hong; Jonathan Z Simon
Journal:  Curr Biol       Date:  2018-11-29       Impact factor: 10.834

6.  Integration over multiple timescales in primary auditory cortex.

Authors:  Stephen V David; Shihab A Shamma
Journal:  J Neurosci       Date:  2013-12-04       Impact factor: 6.167

7.  Neural Encoding of Auditory Features during Music Perception and Imagery.

Authors:  Stephanie Martin; Christian Mikutta; Matthew K Leonard; Dylan Hungate; Stefan Koelsch; Shihab Shamma; Edward F Chang; José Del R Millán; Robert T Knight; Brian N Pasley
Journal:  Cereb Cortex       Date:  2018-12-01       Impact factor: 5.357

8.  Rhythmic auditory cortex activity at multiple timescales shapes stimulus-response gain and background firing.

Authors:  Christoph Kayser; Caroline Wilson; Houman Safaai; Shuzo Sakata; Stefano Panzeri
Journal:  J Neurosci       Date:  2015-05-20       Impact factor: 6.167

9.  Rapid synaptic depression explains nonlinear modulation of spectro-temporal tuning in primary auditory cortex by natural stimuli.

Authors:  Stephen V David; Nima Mesgarani; Jonathan B Fritz; Shihab A Shamma
Journal:  J Neurosci       Date:  2009-03-18       Impact factor: 6.167

10.  Adaptive temporal encoding leads to a background-insensitive cortical representation of speech.

Authors:  Nai Ding; Jonathan Z Simon
Journal:  J Neurosci       Date:  2013-03-27       Impact factor: 6.167

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