Literature DB >> 17709398

The Swi/Snf complex is important for histone eviction during transcriptional activation and RNA polymerase II elongation in vivo.

Marc A Schwabish1, Kevin Struhl.   

Abstract

The Swi/Snf nucleosome-remodeling complex is recruited by DNA-binding activator proteins, whereupon it alters chromatin structure to increase preinitiation complex formation and transcription. At the SUC2 promoter, the Swi/Snf complex is required for histone eviction in a manner that is independent of transcriptional activity. Swi/Snf travels through coding regions with elongating RNA polymerase (Pol) II, and swi2 mutants exhibit sensitivity to drugs affecting Pol elongation. In FACT-depleted cells, Swi/Snf is important for internal initiation within coding regions, suggesting that Swi/Snf is important for histone eviction that occurs during Pol II elongation. Taken together, these observations suggest that Swi/Snf is important for histone eviction at enhancers and that it also functions as a Pol II elongation factor.

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Year:  2007        PMID: 17709398      PMCID: PMC2168902          DOI: 10.1128/MCB.00717-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  62 in total

1.  Histone acetylation at promoters is differentially affected by specific activators and repressors.

Authors:  J Deckert; K Struhl
Journal:  Mol Cell Biol       Date:  2001-04       Impact factor: 4.272

2.  Recruitment of the SWI/SNF chromatin remodeling complex by transcriptional activators.

Authors:  N Yudkovsky; C Logie; S Hahn; C L Peterson
Journal:  Genes Dev       Date:  1999-09-15       Impact factor: 11.361

3.  Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme.

Authors:  L Kuras; K Struhl
Journal:  Nature       Date:  1999-06-10       Impact factor: 49.962

4.  Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/mediator.

Authors:  K Natarajan; B M Jackson; H Zhou; F Winston; A G Hinnebusch
Journal:  Mol Cell       Date:  1999-10       Impact factor: 17.970

Review 5.  The Swi/Snf family nucleosome-remodeling complexes and transcriptional control.

Authors:  P Sudarsanam; F Winston
Journal:  Trends Genet       Date:  2000-08       Impact factor: 11.639

6.  Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter.

Authors:  M P Cosma; T Tanaka; K Nasmyth
Journal:  Cell       Date:  1999-04-30       Impact factor: 41.582

7.  Evidence for histone eviction in trans upon induction of the yeast PHO5 promoter.

Authors:  Philipp Korber; Tim Luckenbach; Dorothea Blaschke; Wolfram Hörz
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

8.  Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding.

Authors:  P D Gregory; A Schmid; M Zavari; M Münsterkötter; W Hörz
Journal:  EMBO J       Date:  1999-11-15       Impact factor: 11.598

9.  Genetic interactions between TFIIS and the Swi-Snf chromatin-remodeling complex.

Authors:  J K Davie; C M Kane
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

10.  Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.

Authors:  Marc A Schwabish; Kevin Struhl
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

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  83 in total

1.  In vivo role for the chromatin-remodeling enzyme SWI/SNF in the removal of promoter nucleosomes by disassembly rather than sliding.

Authors:  Christopher R Brown; Changhui Mao; Elena Falkovskaia; Jason K Law; Hinrich Boeger
Journal:  J Biol Chem       Date:  2011-10-06       Impact factor: 5.157

2.  Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver.

Authors:  Brad G Hoffman; Gordon Robertson; Bogard Zavaglia; Mike Beach; Rebecca Cullum; Sam Lee; Galina Soukhatcheva; Leping Li; Elizabeth D Wederell; Nina Thiessen; Mikhail Bilenky; Timothee Cezard; Angela Tam; Baljit Kamoh; Inanc Birol; Derek Dai; Yongjun Zhao; Martin Hirst; C Bruce Verchere; Cheryl D Helgason; Marco A Marra; Steven J M Jones; Pamela A Hoodless
Journal:  Genome Res       Date:  2010-06-15       Impact factor: 9.043

3.  Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro.

Authors:  Benjamin G Kuryan; Jessica Kim; Nancy Nga H Tran; Sarah R Lombardo; Swaminathan Venkatesh; Jerry L Workman; Michael Carey
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-23       Impact factor: 11.205

4.  Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors.

Authors:  Bhawana Uprety; Amala Kaja; Jannatul Ferdoush; Rwik Sen; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2016-01-11       Impact factor: 4.272

5.  Role of Nhp6 and Hmo1 in SWI/SNF occupancy and nucleosome landscape at gene regulatory regions.

Authors:  Matias I Hepp; Michaela Smolle; Cristian Gidi; Roberto Amigo; Nicole Valenzuela; Axel Arriagada; Alejandro Maureira; Madelaine M Gogol; Marcela Torrejón; Jerry L Workman; José L Gutiérrez
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2017-01-09       Impact factor: 4.490

6.  An rtt109-independent role for vps75 in transcription-associated nucleosome dynamics.

Authors:  Luke A Selth; Yahli Lorch; Maria T Ocampo-Hafalla; Richard Mitter; Michael Shales; Nevan J Krogan; Roger D Kornberg; Jesper Q Svejstrup
Journal:  Mol Cell Biol       Date:  2009-05-26       Impact factor: 4.272

7.  Spt6 enhances the elongation rate of RNA polymerase II in vivo.

Authors:  M Behfar Ardehali; Jie Yao; Karen Adelman; Nicholas J Fuda; Steven J Petesch; Watt W Webb; John T Lis
Journal:  EMBO J       Date:  2009-03-12       Impact factor: 11.598

8.  Mechanisms of antisense transcription initiation from the 3' end of the GAL10 coding sequence in vivo.

Authors:  Shivani Malik; Geetha Durairaj; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2013-07-08       Impact factor: 4.272

9.  The identification of putative RNA polymerase II C-terminal domain associated proteins in red and green algae.

Authors:  Chunlin Yang; Paul W Hager; John W Stiller
Journal:  Transcription       Date:  2014-12-10

Review 10.  How eukaryotic genes are transcribed.

Authors:  Bryan J Venters; B Franklin Pugh
Journal:  Crit Rev Biochem Mol Biol       Date:  2009-06       Impact factor: 8.250

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