Literature DB >> 1762908

Apolipoprotein B mRNA sequences 3' of the editing site are necessary and sufficient for editing and editosome assembly.

J W Backus1, H C Smith.   

Abstract

Apolipoprotein B (apoB) mRNA is edited in rat liver and intestine through the direct conversion of cytidine to uridine at nucleotide 6666. Recently, we have proposed the 'Mooring Sequence' model, in which editing complexes (editosomes) assemble on specific apoB mRNA flanking sequences to direct this site-specific editing event. To test this model, apoB mRNA deletion and translocation mutants were constructed and analyzed. Specific sequences 3' of the editing site were absolutely required for editing, while specific sequences and bulk RNA 5' of the editing site were required for efficient editing. Translocation of apoB 3' flanking sequences induced editing of an upstream cytidine, demonstrating that 3' sequences are necessary and sufficient to direct editing in vitro. 3' flanking sequences were also shown to be necessary and sufficient for editosome complex assembly. These data provide strong support for a 'Mooring Sequence' model in which 3' apoB flanking sequences direct editosome assembly and subsequent editing in vitro, while 5' flanking sequences enhance these functions.

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Year:  1991        PMID: 1762908      PMCID: PMC329309          DOI: 10.1093/nar/19.24.6781

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  20 in total

1.  Apolipoprotein B mRNA editing. Direct determination of the edited base and occurrence in non-apolipoprotein B-producing cell lines.

Authors:  K Boström; Z Garcia; K S Poksay; D F Johnson; A J Lusis; T L Innerarity
Journal:  J Biol Chem       Date:  1990-12-25       Impact factor: 5.157

2.  RNA editing by cytidine insertion in mitochondria of Physarum polycephalum.

Authors:  R Mahendran; M R Spottswood; D L Miller
Journal:  Nature       Date:  1991-01-31       Impact factor: 49.962

3.  Intestinal epithelial cell surface membrane glycoprotein synthesis. I. An indicator of cellular differentiation.

Authors:  M M Weiser
Journal:  J Biol Chem       Date:  1973-04-10       Impact factor: 5.157

4.  Apolipoprotein B messenger RNA editing in the rat liver. Modulation by fasting and refeeding a high carbohydrate diet.

Authors:  C L Baum; B B Teng; N O Davidson
Journal:  J Biol Chem       Date:  1990-11-05       Impact factor: 5.157

5.  A 40 kilodalton rat liver nuclear protein binds specifically to apolipoprotein B mRNA around the RNA editing site.

Authors:  P P Lau; S H Chen; J C Wang; L Chan
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

6.  Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Authors:  J D Dignam; R M Lebovitz; R G Roeder
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

7.  Sequence requirements for the editing of apolipoprotein B mRNA.

Authors:  R R Shah; T J Knott; J E Legros; N Navaratnam; J C Greeve; J Scott
Journal:  J Biol Chem       Date:  1991-09-05       Impact factor: 5.157

8.  Thyroid hormone modulates the introduction of a stop codon in rat liver apolipoprotein B messenger RNA.

Authors:  N O Davidson; L M Powell; S C Wallis; J Scott
Journal:  J Biol Chem       Date:  1988-09-25       Impact factor: 5.157

9.  Sequence requirements for apolipoprotein B RNA editing in transfected rat hepatoma cells.

Authors:  M S Davies; S C Wallis; D M Driscoll; J K Wynne; G W Williams; L M Powell; J Scott
Journal:  J Biol Chem       Date:  1989-08-15       Impact factor: 5.157

10.  In vitro apolipoprotein B mRNA editing: identification of a 27S editing complex.

Authors:  H C Smith; S R Kuo; J W Backus; S G Harris; C E Sparks; J D Sparks
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-15       Impact factor: 11.205

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  20 in total

1.  Identification of DNA cleavage- and recombination-specific hnRNP cofactors for activation-induced cytidine deaminase.

Authors:  Wenjun Hu; Nasim A Begum; Samiran Mondal; Andre Stanlie; Tasuku Honjo
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

2.  The formation of mitochondrial ribonucleoprotein complexes involving guide RNA molecules in Trypanosoma brucei.

Authors:  H U Göringer; D J Koslowsky; T H Morales; K Stuart
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-01       Impact factor: 11.205

3.  Apolipoprotein B RNA sequence 3' of the mooring sequence and cellular sources of auxiliary factors determine the location and extent of promiscuous editing.

Authors:  M P Sowden; M J Eagleton; H C Smith
Journal:  Nucleic Acids Res       Date:  1998-04-01       Impact factor: 16.971

4.  Apolipoprotein B mRNA and lipoprotein secretion are increased in McArdle RH-7777 cells by expression of betaine-homocysteine S-methyltransferase.

Authors:  M P Sowden; H L Collins; H C Smith; T A Garrow; J D Sparks; C E Sparks
Journal:  Biochem J       Date:  1999-08-01       Impact factor: 3.857

5.  Commitment of apolipoprotein B RNA to the splicing pathway regulates cytidine-to-uridine editing-site utilization.

Authors:  M P Sowden; H C Smith
Journal:  Biochem J       Date:  2001-11-01       Impact factor: 3.857

6.  APOBEC-1 dependent cytidine to uridine editing of apolipoprotein B RNA in yeast.

Authors:  G S Dance; M P Sowden; Y Yang; H C Smith
Journal:  Nucleic Acids Res       Date:  2000-01-15       Impact factor: 16.971

7.  Tissue-specific modification of gld-2 mRNA in C. elegans: likely C-to-U editing.

Authors:  Liaoteng Wang; Judith Kimble; Marvin Wickens
Journal:  RNA       Date:  2004-09       Impact factor: 4.942

8.  Optimization of apolipoprotein B mRNA editing by APOBEC1 apoenzyme and the role of its auxiliary factor, ACF.

Authors:  Ann Chester; Violetta Weinreb; Charles W Carter; Naveenan Navaratnam
Journal:  RNA       Date:  2004-07-23       Impact factor: 4.942

9.  Three distinct RNA sequence elements are required for efficient apolipoprotein B (apoB) RNA editing in vitro.

Authors:  J W Backus; H C Smith
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

10.  The neurofibromatosis type I messenger RNA undergoes base-modification RNA editing.

Authors:  G R Skuse; A J Cappione; M Sowden; L J Metheny; H C Smith
Journal:  Nucleic Acids Res       Date:  1996-02-01       Impact factor: 16.971

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