Literature DB >> 17523641

Single-molecule conformational analysis of G-quadruplex formation in the promoter DNA duplex of the proto-oncogene c-kit.

Pravin S Shirude1, Burak Okumus, Liming Ying, Taekjip Ha, Shankar Balasubramanian.   

Abstract

Entities:  

Mesh：

Substances：

Year:  2007        PMID： 17523641      PMCID： PMC2195893          DOI： 10.1021/ja070497d

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN： 0002-7863            Impact factor:   15.419


× No keyword cloud information.
  18 in total

Review 1.  G-quadruplex DNA structures--variations on a theme.

Authors:  T Simonsson
Journal:  Biol Chem       Date:  2001-04       Impact factor: 3.915

2.  Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer.

Authors:  Liming Ying; Jeremy J Green; Haitao Li; David Klenerman; Shankar Balasubramanian
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-25       Impact factor: 11.205

Review 3.  Guanine quartet structures.

Authors:  D Sen; W Gilbert
Journal:  Methods Enzymol       Date:  1992       Impact factor: 1.600

Review 4.  Structural dynamics and processing of nucleic acids revealed by single-molecule spectroscopy.

Authors:  Taekjip Ha
Journal:  Biochemistry       Date:  2004-04-13       Impact factor: 3.162

Review 5.  Structure and function of telomeres.

Authors:  E H Blackburn
Journal:  Nature       Date:  1991-04-18       Impact factor: 49.962

6.  Propeller-type parallel-stranded G-quadruplexes in the human c-myc promoter.

Authors:  Anh Tuân Phan; Yasha S Modi; Dinshaw J Patel
Journal:  J Am Chem Soc       Date:  2004-07-21       Impact factor: 15.419

7.  Telomeric DNA oligonucleotides form novel intramolecular structures containing guanine-guanine base pairs.

Authors:  E Henderson; C C Hardin; S K Walk; I Tinoco; E H Blackburn
Journal:  Cell       Date:  1987-12-24       Impact factor: 41.582

8.  Structure and stability of human telomeric sequence.

Authors:  P Balagurumoorthy; S K Brahmachari
Journal:  J Biol Chem       Date:  1994-08-26       Impact factor: 5.157

9.  Vesicle encapsulation studies reveal that single molecule ribozyme heterogeneities are intrinsic.

Authors:  Burak Okumus; Timothy J Wilson; David M J Lilley; Taekjip Ha
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

10.  G-quadruplexes in promoters throughout the human genome.

Authors:  Julian L Huppert; Shankar Balasubramanian
Journal:  Nucleic Acids Res       Date:  2006-12-14       Impact factor: 16.971
View more
  44 in total

1.  Folding Landscape of a Parallel G-Quadruplex.

Authors:  Robert D Gray; John O Trent; Sengodagounder Arumugam; Jonathan B Chaires
Journal:  J Phys Chem Lett       Date:  2019-02-27       Impact factor: 6.475

Review 2.  Quartets in G-major. The First International Meeting on Quadruplex DNA.

Authors:  Paula Bates; Jean-Louis Mergny; Danzhou Yang
Journal:  EMBO Rep       Date:  2007-09-28       Impact factor: 8.807

Review 3.  In vivo veritas: using yeast to probe the biological functions of G-quadruplexes.

Authors:  Jay E Johnson; Jasmine S Smith; Marina L Kozak; F Brad Johnson
Journal:  Biochimie       Date:  2008-02-21       Impact factor: 4.079

Review 4.  Structures, folding patterns, and functions of intramolecular DNA G-quadruplexes found in eukaryotic promoter regions.

Authors:  Yong Qin; Laurence H Hurley
Journal:  Biochimie       Date:  2008-02-29       Impact factor: 4.079

Review 5.  G-quadruplexes-novel mediators of gene function.

Authors:  Wenhua Zhou; Nigel J Brand; Liming Ying
Journal:  J Cardiovasc Transl Res       Date:  2011-02-08       Impact factor: 4.132

6.  The i-motif in the bcl-2 P1 promoter forms an unexpectedly stable structure with a unique 8:5:7 loop folding pattern.

Authors:  Samantha Kendrick; Yoshitsugu Akiyama; Sidney M Hecht; Laurence H Hurley
Journal:  J Am Chem Soc       Date:  2009-12-09       Impact factor: 15.419

7.  G-quadruplex nucleic acids as therapeutic targets.

Authors:  Shankar Balasubramanian; Stephen Neidle
Journal:  Curr Opin Chem Biol       Date:  2009-06-08       Impact factor: 8.822

8.  "One ring to bind them all"-part I: the efficiency of the macrocyclic scaffold for g-quadruplex DNA recognition.

Authors:  David Monchaud; Anton Granzhan; Nicolas Saettel; Aurore Guédin; Jean-Louis Mergny; Marie-Paule Teulade-Fichou
Journal:  J Nucleic Acids       Date:  2010-05-24

9.  A G-rich sequence within the c-kit oncogene promoter forms a parallel G-quadruplex having asymmetric G-tetrad dynamics.

Authors:  Shang-Te Danny Hsu; Peter Varnai; Anthony Bugaut; Anthony P Reszka; Stephen Neidle; Shankar Balasubramanian
Journal:  J Am Chem Soc       Date:  2009-09-23       Impact factor: 15.419

10.  Altered gene expression in the Werner and Bloom syndromes is associated with sequences having G-quadruplex forming potential.

Authors:  Jay E Johnson; Kajia Cao; Paul Ryvkin; Li-San Wang; F Brad Johnson
Journal:  Nucleic Acids Res       Date:  2009-12-04       Impact factor: 16.971
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.