Literature DB >> 11405224

G-quadruplex DNA structures--variations on a theme.

T Simonsson1.   

Abstract

To be functional, nucleic acids need to adopt particular three-dimensional structures. For a long time DNA was regarded as a rigid and passive molecule with the sole purpose to store genetic information, but experimental data has now accumulated that indicates the full dynamic repertoire of this macromolecule. During the last decade, four-stranded DNA structures known as G-quadruplexes, or DNA tetraplexes, have emerged as a three-dimensional structure of special interest. Motifs for the formation of G-quadruplex DNA structures are widely dispersed in eukaryotic genomes, and are abundant in regions of biological significance, for example, at telomeres, in the promoters of many important genes, and at recombination hotspots, to name but a few in man. Here I explore the plethora of G-quadruplex DNA structures, and discuss their possible biological functions as well as the proteins that interact with them.

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Year:  2001        PMID: 11405224     DOI: 10.1515/BC.2001.073

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  138 in total

1.  Comparative investigation of the genomic regions involved in antigenic variation of the TprK antigen among treponemal species, subspecies, and strains.

Authors:  Lorenzo Giacani; Stephanie L Brandt; Maritza Puray-Chavez; Tara Brinck Reid; Charmie Godornes; Barbara J Molini; Martin Benzler; Jörg S Hartig; Sheila A Lukehart; Arturo Centurion-Lara
Journal:  J Bacteriol       Date:  2012-06-01       Impact factor: 3.490

2.  Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer.

Authors:  Liming Ying; Jeremy J Green; Haitao Li; David Klenerman; Shankar Balasubramanian
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-25       Impact factor: 11.205

3.  G-quartets direct assembly of HIV-1 nucleocapsid protein along single-stranded DNA.

Authors:  Sébastien Lyonnais; Robert J Gorelick; Jean-Louis Mergny; Eric Le Cam; Gilles Mirambeau
Journal:  Nucleic Acids Res       Date:  2003-10-01       Impact factor: 16.971

4.  Destabilization of tetraplex structures of the fragile X repeat sequence (CGG)n is mediated by homolog-conserved domains in three members of the hnRNP family.

Authors:  Samer Khateb; Pnina Weisman-Shomer; Inbal Hershco; Lawrence A Loeb; Michael Fry
Journal:  Nucleic Acids Res       Date:  2004-08-09       Impact factor: 16.971

5.  Two-repeat Tetrahymena telomeric d(TGGGGTTGGGGT) Sequence interconverts between asymmetric dimeric G-quadruplexes in solution.

Authors:  Anh Tuân Phan; Yasha S Modi; Dinshaw J Patel
Journal:  J Mol Biol       Date:  2004-04-16       Impact factor: 5.469

6.  Unusual salt-induced behaviour of guanine-rich natural DNA evidenced by dynamic light scattering.

Authors:  Massimo Zimbone; Gabriele Bonaventura; Pietro Baeri; Maria Luisa Barcellona
Journal:  Eur Biophys J       Date:  2012-02-19       Impact factor: 1.733

7.  The effect on quadruplex stability of North-nucleoside derivatives in the loops of the thrombin-binding aptamer.

Authors:  Anna Aviñó; Stefania Mazzini; Ruben Ferreira; Raimundo Gargallo; Victor E Marquez; Ramon Eritja
Journal:  Bioorg Med Chem       Date:  2012-06-09       Impact factor: 3.641

8.  Small circular DNAs for synthesis of the human telomere repeat: varied sizes, structures and telomere-encoding activities.

Authors:  Jörg S Hartig; Eric T Kool
Journal:  Nucleic Acids Res       Date:  2004-11-01       Impact factor: 16.971

9.  Kinetic stability of intermolecular DNA quadruplexes.

Authors:  Elena E Merkina; Keith R Fox
Journal:  Biophys J       Date:  2005-04-22       Impact factor: 4.033

10.  Propeller-type parallel-stranded G-quadruplexes in the human c-myc promoter.

Authors:  Anh Tuân Phan; Yasha S Modi; Dinshaw J Patel
Journal:  J Am Chem Soc       Date:  2004-07-21       Impact factor: 15.419

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