Literature DB >> 17501946

Comparison of group testing algorithms for case identification in the presence of test error.

Hae-Young Kim1, Michael G Hudgens, Jonathan M Dreyfuss, Daniel J Westreich, Christopher D Pilcher.   

Abstract

We derive and compare the operating characteristics of hierarchical and square array-based testing algorithms for case identification in the presence of testing error. The operating characteristics investigated include efficiency (i.e., expected number of tests per specimen) and error rates (i.e., sensitivity, specificity, positive and negative predictive values, per-family error rate, and per-comparison error rate). The methodology is illustrated by comparing different pooling algorithms for the detection of individuals recently infected with HIV in North Carolina and Malawi.

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Year:  2007        PMID: 17501946     DOI: 10.1111/j.1541-0420.2007.00817.x

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  40 in total

1.  Group testing for case identification with correlated responses.

Authors:  Samuel D Lendle; Michael G Hudgens; Bahjat F Qaqish
Journal:  Biometrics       Date:  2011-09-27       Impact factor: 2.571

2.  binGroup: A Package for Group Testing.

Authors:  Christopher R Bilder; Boan Zhang; Frank Schaarschmidt; Joshua M Tebbs
Journal:  R J       Date:  2010-12-01       Impact factor: 3.984

3.  Bayesian regression for group testing data.

Authors:  Christopher S McMahan; Joshua M Tebbs; Timothy E Hanson; Christopher R Bilder
Journal:  Biometrics       Date:  2017-04-12       Impact factor: 2.571

4.  Optimizing screening for acute human immunodeficiency virus infection with pooled nucleic acid amplification tests.

Authors:  Daniel J Westreich; Michael G Hudgens; Susan A Fiscus; Christopher D Pilcher
Journal:  J Clin Microbiol       Date:  2008-03-19       Impact factor: 5.948

5.  Regression models for group testing data with pool dilution effects.

Authors:  Christopher S McMahan; Joshua M Tebbs; Christopher R Bilder
Journal:  Biostatistics       Date:  2012-11-28       Impact factor: 5.899

6.  Two-stage hierarchical group testing for multiple infections with application to the infertility prevention project.

Authors:  Joshua M Tebbs; Christopher S McMahan; Christopher R Bilder
Journal:  Biometrics       Date:  2013-10-04       Impact factor: 2.571

7.  Pooled nucleic acid testing to identify antiretroviral treatment failure during HIV infection.

Authors:  Susanne May; Anthony Gamst; Richard Haubrich; Constance Benson; Davey M Smith
Journal:  J Acquir Immune Defic Syndr       Date:  2010-02       Impact factor: 3.731

8.  Three-dimensional array-based group testing algorithms.

Authors:  Hae-Young Kim; Michael G Hudgens
Journal:  Biometrics       Date:  2008-11-13       Impact factor: 2.571

9.  Group testing regression models with fixed and random effects.

Authors:  Peng Chen; Joshua M Tebbs; Christopher R Bilder
Journal:  Biometrics       Date:  2009-12       Impact factor: 2.571

10.  Group testing regression models with dilution submodels.

Authors:  Md S Warasi; Christopher S McMahan; Joshua M Tebbs; Christopher R Bilder
Journal:  Stat Med       Date:  2017-08-30       Impact factor: 2.373

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