Literature DB >> 17497247

Chromosomal evolution of Arvicolinae (Cricetidae, Rodentia). I. The genome homology of tundra vole, field vole, mouse and golden hamster revealed by comparative chromosome painting.

Natalia A Sitnikova1, Svetlana A Romanenko, Patricia C M O'Brien, Polina L Perelman, Beiyuan Fu, Nadezhda V Rubtsova, Natalya A Serdukova, Feodor N Golenishchev, Vladimir A Trifonov, Malcolm A Ferguson-Smith, Fengtang Yang, Alexander S Graphodatsky.   

Abstract

Cross-species chromosome painting has become the mainstay of comparative cytogenetic and chromosome evolution studies. Here we have made a set of chromosomal painting probes for the field vole (Microtus agrestis) by DOP-PCR amplification of flow-sorted chromosomes. Together with painting probes of golden hamster (Mesocricetus auratus) and mouse (Mus musculus), the field vole probes have been hybridized onto the metaphases of the tundra vole (Microtus oeconomus). A comparative chromosome map between these two voles, golden hamster and mouse has been established based on the results of cross-species chromosome painting and G-banding comparisons. The sets of paints from the field vole, golden hamster and mouse identified a total of 27, 40 and 47 homologous autosomal regions, respectively, in the genome of tundra vole; 16, 41 and 51 fusion/fission rearrangements differentiate the karyotype of the tundra vole from the karyotypes of the field vole, golden hamster and mouse, respectively.

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Year:  2007        PMID: 17497247     DOI: 10.1007/s10577-007-1137-y

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  34 in total

1.  Comparative chromosome map of the laboratory mouse and Chinese hamster defined by reciprocal chromosome painting.

Authors:  F Yang; P C O'Brien; M A Ferguson-Smith
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

2.  X chromosome painting in Microtus: origin and evolution of the giant sex chromosomes.

Authors:  J A Marchal; M J Acosta; H Nietzel; K Sperling; M Bullejos; R Díaz de la Guardia; A Sánchez
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

3.  Speciation durations and Pleistocene effects on vertebrate phylogeography.

Authors:  J C Avise; D Walker; G C Johns
Journal:  Proc Biol Sci       Date:  1998-09-22       Impact factor: 5.349

Review 4.  Aberrant chromosomal sex-determining mechanisms in mammals, with special reference to species with XY females.

Authors:  K Fredga
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1988-12-01       Impact factor: 6.237

5.  Phylogenomics of the genus Mus (Rodentia; Muridae): extensive genome repatterning is not restricted to the house mouse.

Authors:  Frederic Veyrunes; Gauthier Dobigny; Fengtang Yang; Patricia C M O'Brien; Josette Catalan; Terence J Robinson; Janice Britton-Davidian
Journal:  Proc Biol Sci       Date:  2006-12-07       Impact factor: 5.349

6.  A translocated mitochondrial cytochrome b pseudogene in voles (Rodentia: Microtus)

Authors:  J A DeWoody; R K Chesser; R J Baker
Journal:  J Mol Evol       Date:  1999-03       Impact factor: 2.395

7.  Comparative analyses of heterochromatin in Microtus: sequence heterogeneity and localized expansion and contraction of satellite DNA arrays.

Authors:  W S Modi
Journal:  Cytogenet Cell Genet       Date:  1993

8.  Molecular phylogeny of the speciose vole genus Microtus (Arvicolinae, Rodentia) inferred from mitochondrial DNA sequences.

Authors:  Maarit Jaarola; Natália Martínková; Islam Gündüz; Cecilia Brunhoff; Jan Zima; Adam Nadachowski; Giovanni Amori; Nina S Bulatova; Basil Chondropoulos; Stella Fraguedakis-Tsolis; Jorge González-Esteban; María José López-Fuster; Andrei S Kandaurov; Haluk Kefelioğlu; Maria da Luz Mathias; Idoia Villate; Jeremy B Searle
Journal:  Mol Phylogenet Evol       Date:  2004-12       Impact factor: 4.286

9.  Phylogeny and divergence-date estimates of rapid radiations in muroid rodents based on multiple nuclear genes.

Authors:  Scott Steppan; Ronald Adkins; Joel Anderson
Journal:  Syst Biol       Date:  2004-08       Impact factor: 15.683

10.  Simple GATCA repeats characterize the X chromosomal heterochromatin of Microtus agrestis, European field vole (Rodentia, Cricetidae).

Authors:  I Nanda; H Neitzel; K Sperling; R Studer; J T Epplen
Journal:  Chromosoma       Date:  1988       Impact factor: 4.316

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  28 in total

Review 1.  Chromosomal evolution in Rodentia.

Authors:  S A Romanenko; P L Perelman; V A Trifonov; A S Graphodatsky
Journal:  Heredity (Edinb)       Date:  2011-11-16       Impact factor: 3.821

2.  Rapid, independent, and extensive amplification of telomeric repeats in pericentromeric regions in karyotypes of arvicoline rodents.

Authors:  M Th Rovatsos; J A Marchal; I Romero-Fernández; F J Fernández; E B Giagia-Athanosopoulou; Antonio Sánchez
Journal:  Chromosome Res       Date:  2011-10-07       Impact factor: 5.239

3.  Epigenetic modifications in sex heterochromatin of vole rodents.

Authors:  I Romero-Fernández; C S Casas-Delucchi; M Cano-Linares; M Arroyo; A Sánchez; M C Cardoso; J A Marchal
Journal:  Chromosoma       Date:  2014-12-21       Impact factor: 4.316

4.  Chromosomal evolution of Arvicolinae (Cricetidae, Rodentia). III. Karyotype relationships of ten Microtus species.

Authors:  Natalia A Lemskaya; Svetlana A Romanenko; Feodor N Golenishchev; Nadezhda V Rubtsova; Olga V Sablina; Natalya A Serdukova; Patricia C M O'Brien; Beiyuan Fu; Nuri Yiğit; Malcolm A Ferguson-Smith; Fengtang Yang; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2010-04-09       Impact factor: 5.239

5.  Reconstruction of karyotype evolution in core Glires. I. The genome homology revealed by comparative chromosome painting.

Authors:  Violetta R Beklemisheva; Svetlana A Romanenko; Larisa S Biltueva; Vladimir A Trifonov; Nadezhda V Vorobieva; Natalya A Serdukova; Nadezhda V Rubtsova; Oleg V Brandler; Patricia C M O'Brien; Fentang Yang; Roscoe Stanyon; Malcolm A Ferguson-Smith; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2011-05-11       Impact factor: 5.239

6.  Praomys tullbergi (Muridae, Rodentia) genome architecture decoded by comparative chromosome painting with Mus and Rattus.

Authors:  Raquel Chaves; Sandra Louzada; Susana Meles; Johannes Wienberg; Filomena Adega
Journal:  Chromosome Res       Date:  2012-07-31       Impact factor: 5.239

7.  Genome-wide comparative chromosome maps of Arvicola amphibius, Dicrostonyx torquatus, and Myodes rutilus.

Authors:  Svetlana A Romanenko; Natalya A Lemskaya; Vladimir A Trifonov; Natalya A Serdyukova; Patricia C M O'Brien; Nina Sh Bulatova; Feodor N Golenishchev; Malcolm A Ferguson-Smith; Fengtang Yang; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2015-11-26       Impact factor: 5.239

8.  Chromosomal phylogeny of four Akodontini species (Rodentia, Cricetidae) from southern Brazil established by Zoo-FISH using Mus musculus (Muridae) painting probes.

Authors:  Iris Hass; Ives José Sbalqueiro; Stefan Müller
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

9.  Patterns of chromosomal evolution in Sigmodon, evidence from whole chromosome paints.

Authors:  V J Swier; R D Bradley; W Rens; F F B Elder; R J Baker
Journal:  Cytogenet Genome Res       Date:  2009-07-14       Impact factor: 1.636

10.  Chromosomal evolution of Arvicolinae (Cricetidae, Rodentia). II. The genome homology of two mole voles (genus Ellobius), the field vole and golden hamster revealed by comparative chromosome painting.

Authors:  Svetlana A Romanenko; Natalia A Sitnikova; Natalya A Serdukova; Polina L Perelman; Nadezhda V Rubtsova; Irina Yu Bakloushinskaya; Elena A Lyapunova; Walter Just; Malcolm A Ferguson-Smith; Fengtang Yang; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2007-10-12       Impact factor: 5.239

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