Literature DB >> 26611440

Genome-wide comparative chromosome maps of Arvicola amphibius, Dicrostonyx torquatus, and Myodes rutilus.

Svetlana A Romanenko1,2, Natalya A Lemskaya3, Vladimir A Trifonov3,4, Natalya A Serdyukova3, Patricia C M O'Brien5, Nina Sh Bulatova6, Feodor N Golenishchev7, Malcolm A Ferguson-Smith5, Fengtang Yang8, Alexander S Graphodatsky3.   

Abstract

The subfamily Arvicolinae consists of a great number of species with highly diversified karyotypes. In spite of the wide use of arvicolines in biological and medicine studies, the data on their karyotype structures are limited. Here, we made a set of painting probes from flow-sorted chromosomes of a male Palearctic collared lemming (Dicrostonyx torquatus, DTO). Together with the sets of painting probes made previously from the field vole (Microtus agrestis, MAG) and golden hamster (Mesocricetus auratus, MAU), we carried out a reciprocal chromosome painting between these three species. The three sets of probes were further hybridized onto the chromosomes of the Eurasian water vole (Arvicola amphibius) and northern red-backed vole (Myodes rutilus). We defined the diploid chromosome number in D. torquatus karyotype as 2n = 45 + Bs and showed that the system of sex chromosomes is X1X2Y1. The probes developed here provide a genomic tool-kit, which will help to investigate the evolutionary biology of the Arvicolinae rodents. Our results show that the syntenic association MAG1/17 is present not only in Arvicolinae but also in some species of Cricetinae; and thus, should not be considered as a cytogenetic signature for Arvicolinae. Although cytogenetic signature markers for the genera have not yet been found, our data provides insight into the likely ancestral karyotype of Arvicolinae. We conclude that the karyotypes of modern voles could have evolved from a common ancestral arvicoline karyotype (AAK) with 2n = 56 mainly by centric fusions and fissions.

Entities:  

Keywords:  Comparative cytogenetics; Karyotype evolution; Lemming; Voles

Mesh:

Substances:

Year:  2015        PMID: 26611440     DOI: 10.1007/s10577-015-9504-6

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  30 in total

1.  Improved telomere detection using a telomere repeat probe (TTAGGG)n generated by PCR.

Authors:  J W Ijdo; R A Wells; A Baldini; S T Reeders
Journal:  Nucleic Acids Res       Date:  1991-09-11       Impact factor: 16.971

2.  A comparative analysis of the mole vole sibling species Ellobius tancrei and E. talpinus (Cricetidae, Rodentia) through chromosome painting and examination of synaptonemal complex structures in hybrids.

Authors:  I Yu Bakloushinskaya; S N Matveevsky; S A Romanenko; N A Serdukova; O L Kolomiets; V E Spangenberg; E A Lyapunova; A S Graphodatsky
Journal:  Cytogenet Genome Res       Date:  2012-02-16       Impact factor: 1.636

3.  A translocated mitochondrial cytochrome b pseudogene in voles (Rodentia: Microtus)

Authors:  J A DeWoody; R K Chesser; R J Baker
Journal:  J Mol Evol       Date:  1999-03       Impact factor: 2.395

4.  Characterization of the satellite DNA Msat-160 from species of Terricola (Microtus) and Arvicola (Rodentia, Arvicolinae).

Authors:  Manuel J Acosta; Juan A Marchal; Cecilia Fernández-Espartero; Ismael Romero-Fernández; Michail T Rovatsos; Eva B Giagia-Athanasopoulou; Ekaterina Gornung; Riccardo Castiglia; Antonio Sánchez
Journal:  Genetica       Date:  2010-09-10       Impact factor: 1.082

5.  Molecular phylogeny of the speciose vole genus Microtus (Arvicolinae, Rodentia) inferred from mitochondrial DNA sequences.

Authors:  Maarit Jaarola; Natália Martínková; Islam Gündüz; Cecilia Brunhoff; Jan Zima; Adam Nadachowski; Giovanni Amori; Nina S Bulatova; Basil Chondropoulos; Stella Fraguedakis-Tsolis; Jorge González-Esteban; María José López-Fuster; Andrei S Kandaurov; Haluk Kefelioğlu; Maria da Luz Mathias; Idoia Villate; Jeremy B Searle
Journal:  Mol Phylogenet Evol       Date:  2004-12       Impact factor: 4.286

6.  New insights into the karyotypic evolution in muroid rodents revealed by multicolor banding applying murine probes.

Authors:  Vladimir A Trifonov; Nadezda Kosyakova; Svetlana A Romanenko; Roscoe Stanyon; Alexander S Graphodatsky; Thomas Liehr
Journal:  Chromosome Res       Date:  2010-02-02       Impact factor: 5.239

7.  Cytogenetic analysis by chromosome painting using DOP-PCR amplified flow-sorted chromosomes.

Authors:  H Telenius; A H Pelmear; A Tunnacliffe; N P Carter; A Behmel; M A Ferguson-Smith; M Nordenskjöld; R Pfragner; B A Ponder
Journal:  Genes Chromosomes Cancer       Date:  1992-04       Impact factor: 5.006

8.  [Supraspecies relationships in the subfamily (Rodentia, Cricetidae, Arvicolinae): unexpexted result of nuclear genes analysis].

Authors:  N I Abramson; V S Lebedev; A S Tesakov; A A Bannikova
Journal:  Mol Biol (Mosk)       Date:  2009 Sep-Oct

Review 9.  Aberrant sex chromosome mechanisms in mammals. Evolutionary aspects.

Authors:  K Fredga
Journal:  Differentiation       Date:  1983       Impact factor: 3.880

10.  Historical biogeography at the crossroads of the northern continents: molecular phylogenetics of red-backed voles (Rodentia: Arvicolinae).

Authors:  Joseph A Cook; Amy M Runck; Chris J Conroy
Journal:  Mol Phylogenet Evol       Date:  2004-03       Impact factor: 4.286

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  6 in total

1.  Rapid Karyotype Evolution in Lasiopodomys Involved at Least Two Autosome - Sex Chromosome Translocations.

Authors:  Olga L Gladkikh; Svetlana A Romanenko; Natalya A Lemskaya; Natalya A Serdyukova; Patricia C M O'Brien; Julia M Kovalskaya; Antonina V Smorkatcheva; Feodor N Golenishchev; Polina L Perelman; Vladimir A Trifonov; Malcolm A Ferguson-Smith; Fengtang Yang; Alexander S Graphodatsky
Journal:  PLoS One       Date:  2016-12-09       Impact factor: 3.240

Review 2.  Observations on chromosome-specific sequencing for the construction of cross-species chromosome homology maps and its resolution of human:alpaca homology.

Authors:  Malcolm A Ferguson-Smith; Jorge C Pereira; Ana Borges; Fumio Kasai
Journal:  Mol Cytogenet       Date:  2022-10-07       Impact factor: 1.904

3.  Intrachromosomal Rearrangements in Rodents from the Perspective of Comparative Region-Specific Painting.

Authors:  Svetlana A Romanenko; Natalya A Serdyukova; Polina L Perelman; Svetlana V Pavlova; Nina S Bulatova; Feodor N Golenishchev; Roscoe Stanyon; Alexander S Graphodatsky
Journal:  Genes (Basel)       Date:  2017-08-30       Impact factor: 4.096

4.  Complex Structure of Lasiopodomys mandarinus vinogradovi Sex Chromosomes, Sex Determination, and Intraspecific Autosomal Polymorphism.

Authors:  Svetlana A Romanenko; Antonina V Smorkatcheva; Yulia M Kovalskaya; Dmitry Yu Prokopov; Natalya A Lemskaya; Olga L Gladkikh; Ivan A Polikarpov; Natalia A Serdyukova; Vladimir A Trifonov; Anna S Molodtseva; Patricia C M O'Brien; Feodor N Golenishchev; Malcolm A Ferguson-Smith; Alexander S Graphodatsky
Journal:  Genes (Basel)       Date:  2020-03-30       Impact factor: 4.096

5.  Multiple intrasyntenic rearrangements and rapid speciation in voles.

Authors:  Svetlana A Romanenko; Natalya A Serdyukova; Polina L Perelman; Vladimir A Trifonov; Feodor N Golenishchev; Nina Sh Bulatova; Roscoe Stanyon; Alexander S Graphodatsky
Journal:  Sci Rep       Date:  2018-10-08       Impact factor: 4.379

6.  New Data on Comparative Cytogenetics of the Mouse-Like Hamsters (Calomyscus Thomas, 1905) from Iran and Turkmenistan.

Authors:  Svetlana A Romanenko; Vladimir G Malikov; Ahmad Mahmoudi; Feodor N Golenishchev; Natalya A Lemskaya; Jorge C Pereira; Vladimir A Trifonov; Natalia A Serdyukova; Malcolm A Ferguson-Smith; Mansour Aliabadian; Alexander S Graphodatsky
Journal:  Genes (Basel)       Date:  2021-06-24       Impact factor: 4.096

  6 in total

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