Literature DB >> 3282831

Simple GATCA repeats characterize the X chromosomal heterochromatin of Microtus agrestis, European field vole (Rodentia, Cricetidae).

I Nanda1, H Neitzel, K Sperling, R Studer, J T Epplen.   

Abstract

The sex chromosomes of Microtus agrestis are extremely large due to the accumulation of constitutive heterochromatin. We have identified two prominent satellite bands of 2.0 and 2.8 kb in length after HaeIII and HinfI restriction enzyme digestion of genomic DNA, respectively. These satellites are located on the heterochromatic long arm of the X chromosome as shown using Microtus x mouse somatic cell hybrids. By in-gel hybridization with oligonucleotide probes, the organization of the two satellites was studied: among the many copies of the simple tandem tetranucleotide repeat GATA are interspersed rare single GACA tetramers. One of the satellites also harbours related GGAT simple tandem repeats. In situ hybridizations with plasmid-carried or oligonucleotide GATCA probes show clustered silver grains on the long and short arm of the X chromosome. Interspersion of differently organized (GATA)n elements is also demonstrable in the autosomal complement and on the Y chromosome. These results are discussed in the context of the evolution of vertebrate sex chromosomes in relation to heterochromatin and simple repetitive DNA sequences.

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Year:  1988        PMID: 3282831     DOI: 10.1007/bf00302360

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  13 in total

1.  The repeated DNA sequences of Microtinae. II. Localization and interdispersion of repeated sequences in Microtus agrestis.

Authors:  W G Yasmineh; J J Yunis
Journal:  Exp Cell Res       Date:  1975-01       Impact factor: 3.905

2.  Transcriptional activity of constitutive heterochromatin in the mammal Microtus agrestis (Rodentia, Cricetidae).

Authors:  K Sperling; V Kalscheuer; H Neitzel
Journal:  Exp Cell Res       Date:  1987-12       Impact factor: 3.905

3.  The organization of the evolutionarily conserved GATA/GACA repeats in the mouse genome.

Authors:  R Schäfer; S Ali; J T Epplen
Journal:  Chromosoma       Date:  1986       Impact factor: 4.316

4.  A simple technique for demonstrating centromeric heterochromatin.

Authors:  A T Sumner
Journal:  Exp Cell Res       Date:  1972-11       Impact factor: 3.905

5.  Heterochromatin in mammals.

Authors:  W Schmid
Journal:  Arch Julius Klaus Stift Vererbungsforsch Sozialanthropol Rassenhyg       Date:  1967

6.  Hypervariable Bkm DNA Loci in a Moth, Ephestia kuehniella : Does Transposition Cause Restriction Fragment Length Polymorphism?

Authors:  W Traut
Journal:  Genetics       Date:  1987-03       Impact factor: 4.562

7.  Conserved sex-chromosome-associated nucleotide sequences in eukaryotes.

Authors:  L Singh; I F Purdom; K W Jones
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1981

Review 8.  On evolutionarily conserved simple repetitive DNA sequences: do "sex-specific" satellite components serve any sequence dependent function?

Authors:  J T Epple; A Cellini; M Shorte; S Ohno
Journal:  Differentiation       Date:  1983       Impact factor: 3.880

9.  Base sequence of a cloned snake W-chromosome DNA fragment and identification of a male-specific putative mRNA in the mouse.

Authors:  J T Epplen; J R McCarrey; S Sutou; S Ohno
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

10.  Conserved repeated DNA sequences in vertebrate sex chromosomes.

Authors:  K W Jones; L Singh
Journal:  Hum Genet       Date:  1981       Impact factor: 4.132

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  8 in total

1.  Rapid, independent, and extensive amplification of telomeric repeats in pericentromeric regions in karyotypes of arvicoline rodents.

Authors:  M Th Rovatsos; J A Marchal; I Romero-Fernández; F J Fernández; E B Giagia-Athanosopoulou; Antonio Sánchez
Journal:  Chromosome Res       Date:  2011-10-07       Impact factor: 5.239

2.  Chromosomal detection of simple sequence repeats (SSRs) using nondenaturing FISH (ND-FISH).

Authors:  Ángeles Cuadrado; Nicolás Jouve
Journal:  Chromosoma       Date:  2010-10       Impact factor: 4.316

3.  X chromosome painting in Microtus: origin and evolution of the giant sex chromosomes.

Authors:  J A Marchal; M J Acosta; H Nietzel; K Sperling; M Bullejos; R Díaz de la Guardia; A Sánchez
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

Review 4.  Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved "chromatin folding code".

Authors:  P Vogt
Journal:  Hum Genet       Date:  1990-03       Impact factor: 4.132

5.  Chromosomal evolution of Arvicolinae (Cricetidae, Rodentia). I. The genome homology of tundra vole, field vole, mouse and golden hamster revealed by comparative chromosome painting.

Authors:  Natalia A Sitnikova; Svetlana A Romanenko; Patricia C M O'Brien; Polina L Perelman; Beiyuan Fu; Nadezhda V Rubtsova; Natalya A Serdukova; Feodor N Golenishchev; Vladimir A Trifonov; Malcolm A Ferguson-Smith; Fengtang Yang; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2007-05-11       Impact factor: 5.239

6.  Distribution of L1-retroposons on the giant sex chromosomes of Microtus cabrerae (Arvicolidae, Rodentia): functional and evolutionary implications.

Authors:  J A Marchal; M J Acosta; M Bullejos; E Puerma; R Díaz de la Guardia; A Sánchez
Journal:  Chromosome Res       Date:  2006-03-17       Impact factor: 5.239

7.  Chromosome 9 of Ellobius lutescens is the X chromosome.

Authors:  W Vogel; P Steinbach; M Djalali; K Mehnert; S Ali; J T Epplen
Journal:  Chromosoma       Date:  1988       Impact factor: 4.316

8.  Structural and Evolutionary Relationships in the Giant Sex Chromosomes of Three Microtus Species.

Authors:  Luz Lamelas; María Arroyo; Francisco Javier Fernández; Juan Alberto Marchal; Antonio Sánchez
Journal:  Genes (Basel)       Date:  2018-01-10       Impact factor: 4.096

  8 in total

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