Literature DB >> 17372358

A method for the general identification of protein crystals in crystallization experiments using a noncovalent fluorescent dye.

Matthew R Groves1, Ingrid B Müller, Xandra Kreplin, Jochen Müller-Dieckmann.   

Abstract

A technique is described whereby the addition of low concentrations (millimolar to micromolar) of the fluorescent dye 1,8-ANS to the protein solution prior to crystallization results in crystallization experiments in which protein crystals are strongly contrasted above background artifacts when exposed to low-intensity UV radiation. As 1,8-ANS does not covalently modify the protein sample, no further handling or purification steps are necessary. The system has been tested on a wide variety of protein samples and it has been shown that the addition of 1,8-ANS has no discernible effect on the crystallization frequencies or crystallization conditions of these proteins. As 1,8-ANS interacts with a wide variety of proteins, this is proposed to be a general solution for the automated classification of protein crystallization images and the detection of protein crystals. The results also demonstrate the expected discrimination between salt and protein crystals, as well as allowing the straightforward identification of small crystals that grow in precipitate or under a protein skin.

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Year:  2007        PMID: 17372358     DOI: 10.1107/S0907444906056137

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  18 in total

1.  Crystallization and preliminary X-ray diffraction of malate dehydrogenase from Plasmodium falciparum.

Authors:  Carsten Wrenger; Ingrid B Müller; Sabine Butzloff; Rositsa Jordanova; Sergey Lunev; Matthew R Groves
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-05-23

2.  Trial by fire: are the crystals macromolecules?

Authors:  Kannan Raghunathan; Paul T Harris; Dennis N Arvidson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-04-29

3.  Purification, crystallization and preliminary X-ray analysis of the aspartate aminotransferase of Plasmodium falciparum.

Authors:  Rishabh Jain; Rositsa Jordanova; Ingrid B Müller; Carsten Wrenger; Matthew R Groves
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-03-31

4.  Efficient UV detection of protein crystals enabled by fluorescence excitation at wavelengths longer than 300 nm.

Authors:  Karsten Dierks; Arne Meyer; Dominik Oberthür; Gert Rapp; Howard Einspahr; Christian Betzel
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-03-27

5.  Two-photon excited UV fluorescence for protein crystal detection.

Authors:  Jeremy T Madden; Emma L DeWalt; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-09-08

6.  Evaluating the efficacy of tryptophan fluorescence and absorbance as a selection tool for identifying protein crystals.

Authors:  Harindarpal S Gill
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-27

7.  Intercalating dyes for enhanced contrast in second-harmonic generation imaging of protein crystals.

Authors:  Justin A Newman; Nicole M Scarborough; Nicholas R Pogranichniy; Rashmi K Shrestha; Richard G Closser; Chittaranjan Das; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-06-30

8.  Polarization-resolved second-harmonic generation microscopy as a method to visualize protein-crystal domains.

Authors:  Emma L DeWalt; Victoria J Begue; Judith A Ronau; Shane Z Sullivan; Chittaranjan Das; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-12-20

9.  Automation in biological crystallization.

Authors:  Patrick Shaw Stewart; Jochen Mueller-Dieckmann
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-05-28       Impact factor: 1.056

10.  Nonlinear optical imaging of integral membrane protein crystals in lipidic mesophases.

Authors:  David J Kissick; Ellen J Gualtieri; Garth J Simpson; Vadim Cherezov
Journal:  Anal Chem       Date:  2010-01-15       Impact factor: 6.986

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