Literature DB >> 17358819

Channel-facilitated molecular transport across membranes: attraction, repulsion, and asymmetry.

Anatoly B Kolomeisky1.   

Abstract

Transport of molecules across membrane channels is investigated theoretically using exactly solvable discrete stochastic site-binding models. It is shown that the interaction potential between molecules and the channel has a strong effect on translocation dynamics. The presence of attractive binding sites in the pore accelerates the particle current for small concentrations outside the membrane, while for large concentrations, surprisingly, repulsive binding sites yield the most optimal transport. In addition, the asymmetry of the interaction potential also strongly influences the channel transport. The mechanism underlying these phenomena is discussed using the details of particle dynamics at the binding sites.

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Year:  2007        PMID: 17358819     DOI: 10.1103/PhysRevLett.98.048105

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  21 in total

1.  Geometry-induced asymmetric diffusion.

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Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-23       Impact factor: 11.205

2.  Effects of multiple occupancy and interparticle interactions on selective transport through narrow channels: theory versus experiment.

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3.  Effects of jamming on nonequilibrium transport times in nanochannels.

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Journal:  Phys Rev Lett       Date:  2009-09-17       Impact factor: 9.161

4.  Equivalence of two approaches for modeling ion permeation through a transmembrane channel with an internal binding site.

Authors:  Huan-Xiang Zhou
Journal:  J Chem Phys       Date:  2011-04-07       Impact factor: 3.488

5.  Functional role for transporter isoforms in optimizing membrane transport.

Authors:  Alexander M Berezhkovskii; Vladimir A Lizunov; Joshua Zimmerberg; Sergey M Bezrukov
Journal:  Biophys J       Date:  2011-07-20       Impact factor: 4.033

6.  Blocker escape kinetics from a membrane channel analyzed by mapping blocker diffusive dynamics onto a two-site model.

Authors:  Alexander M Berezhkovskii; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2019-05-21       Impact factor: 3.488

7.  Dependence of the Enzymatic Velocity on the Substrate Dissociation Rate.

Authors:  Alexander M Berezhkovskii; Attila Szabo; T Rotbart; M Urbakh; Anatoly B Kolomeisky
Journal:  J Phys Chem B       Date:  2016-12-01       Impact factor: 2.991

8.  Fluxes of non-interacting and strongly repelling particles through a single conical channel: Analytical results and their numerical tests.

Authors:  Alexander M Berezhkovskii; Mark A Pustovoit; Sergey M Bezrukov
Journal:  Chem Phys       Date:  2010-10-05       Impact factor: 2.348

9.  Distributions of lifetime and maximum size of abortive clathrin-coated pits.

Authors:  Anand Banerjee; Alexander Berezhkovskii; Ralph Nossal
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-09-07

10.  Enhancement of transport selectivity through nano-channels by non-specific competition.

Authors:  Anton Zilman; Stefano Di Talia; Tijana Jovanovic-Talisman; Brian T Chait; Michael P Rout; Marcelo O Magnasco
Journal:  PLoS Comput Biol       Date:  2010-06-10       Impact factor: 4.475

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