Literature DB >> 23030944

Distributions of lifetime and maximum size of abortive clathrin-coated pits.

Anand Banerjee1, Alexander Berezhkovskii, Ralph Nossal.   

Abstract

Clathrin-mediated endocytosis is a complex process through which eukaryotic cells internalize nutrients, antigens, growth factors, pathogens, etc. The process occurs via the formation of invaginations on the cell membrane, called clathrin-coated pits (CCPs). Over the years, much has been learned about the mechanism of CCP assembly, but a complete understanding of the assembly process still remains elusive. In recent years, using fluorescence microscopy, studies have been done to determine the statistical properties of CCP formation. In this paper, using a recently proposed coarse-grained, stochastic model of CCP assembly [Banerjee, Berezhkovskii, and Nossal, Biophys. J. 102, 2725 (2012)], we suggest new ways of analyzing such experimental data. To be more specific, we derive analytical expressions for the distribution of maximum size of abortive CCPs, and the probability density of their lifetimes. Our results show how these functions depend on the kinetic and energetic parameters characterizing the assembly process, and therefore could be useful in extracting information about the mechanism of CCP assembly from experimental data. We find excellent agreement between our analytical results and those obtained from kinetic Monte Carlo simulations of the assembly process.

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Year:  2012        PMID: 23030944      PMCID: PMC4264111          DOI: 10.1103/PhysRevE.86.031907

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  19 in total

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Journal:  Curr Biol       Date:  2004-03-23       Impact factor: 10.834

3.  Stochastic model of clathrin-coated pit assembly.

Authors:  Anand Banerjee; Alexander Berezhkovskii; Ralph Nossal
Journal:  Biophys J       Date:  2012-06-19       Impact factor: 4.033

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Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

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Journal:  Biophys J       Date:  1993-04       Impact factor: 4.033

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Authors:  Dinah Loerke; Marcel Mettlen; Sandra L Schmid; Gaudenz Danuser
Journal:  Traffic       Date:  2011-04-21       Impact factor: 6.215

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Journal:  J Ultrastruct Res       Date:  1985 Jul-Aug

9.  Assembly polypeptides from coated vesicles mediate reassembly of unique clathrin coats.

Authors:  S Zaremba; J H Keen
Journal:  J Cell Biol       Date:  1983-11       Impact factor: 10.539

10.  Cargo and dynamin regulate clathrin-coated pit maturation.

Authors:  Dinah Loerke; Marcel Mettlen; Defne Yarar; Khuloud Jaqaman; Henry Jaqaman; Gaudenz Danuser; Sandra L Schmid
Journal:  PLoS Biol       Date:  2009-03-17       Impact factor: 8.029

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