Literature DB >> 17174103

Observation of zwitterion formation in the gas-phase H/D-exchange with CH(3)OD: solution-phase structures in the gas phase.

Nick C Polfer1, Robert C Dunbar, Jos Oomens.   

Abstract

Infrared spectroscopy of gas-phase singly deuterated [Trp + K](+) (formed by H/D exchange with CH(3)OD) shows that some (approximately 20%) kinetically stable zwitterionic (ZW) conformer is formed, based on the diagnostic antisymmetric CO stretch of the deprotonated carboxylate moiety, upsilon(as)(CO(2)(-)), at 1680 cm(-1). A majority of the deuterated [Trp + K](+) is found to be in the charge solvation (CS) conformation, with deuterium exchange occurring on both the acid and amino groups, which is consistent with H/D scrambling. Interestingly, H/D exchange with the more basic ND(3) reagent did not result in the stabilization of a kinetically stable zwitterion, although it is not clear yet what causes this observation. The result for CH(3)OD shows that H/D exchange can in fact alter the structure of the analyte and, hence, care needs to be taken when interpreting gas-phase H/D exchange studies. Moreover, this result shows the possibility of forming solution-phase structures that are thermodynamically disfavored in the gas phase, thus opening a new area of study.

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Year:  2006        PMID: 17174103     DOI: 10.1016/j.jasms.2006.10.015

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  17 in total

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Authors:  Lars Konermann; Douglas A Simmons
Journal:  Mass Spectrom Rev       Date:  2003 Jan-Feb       Impact factor: 10.946

2.  The effect of the initial water of hydration on the energetics, structures, and H/D exchange mechanism of a family of pentapeptides: an experimental and theoretical study.

Authors:  Thomas Wyttenbach; Béla Paizs; Perdita Barran; Linda Breci; Dengfeng Liu; Sándor Suhai; Vicki H Wysocki; Michael T Bowers
Journal:  J Am Chem Soc       Date:  2003-11-12       Impact factor: 15.419

3.  Multidimensional separations of ubiquitin conformers in the gas phase: relating ion cross sections to H/D exchange measurements.

Authors:  Errol W Robinson; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2005-09       Impact factor: 3.109

4.  IRMPD spectroscopy of metal-ion/tryptophan complexes.

Authors:  Nick C Polfer; Jos Oomens; Robert C Dunbar
Journal:  Phys Chem Chem Phys       Date:  2006-05-16       Impact factor: 3.676

5.  Conformational changes in proteins probed by hydrogen-exchange electrospray-ionization mass spectrometry.

Authors:  V Katta; B T Chait
Journal:  Rapid Commun Mass Spectrom       Date:  1991-04       Impact factor: 2.419

6.  Infrared spectroscopy of phenylalanine Ag(I) and Zn(II) complexes in the gas phase.

Authors:  Nick C Polfer; Jos Oomens; David T Moore; Gert von Helden; Gerard Meijer; Robert C Dunbar
Journal:  J Am Chem Soc       Date:  2006-01-18       Impact factor: 15.419

7.  Infrared fingerprint spectroscopy and theoretical studies of potassium ion tagged amino acids and peptides in the gas phase.

Authors:  Nick C Polfer; Béla Paizs; Lavina C Snoek; Isabelle Compagnon; Sándor Suhai; Gerard Meijer; Gert von Helden; Jos Oomens
Journal:  J Am Chem Soc       Date:  2005-06-15       Impact factor: 15.419

8.  Kinetics of gas-phase hydrogen/deuterium exchange and gas-phase structure of protonated phenylalanine, proline, tyrosine and tryptophan.

Authors:  Marko Rozman; Sasa Kazazić; Leo Klasinc; Dunja Srzić
Journal:  Rapid Commun Mass Spectrom       Date:  2003       Impact factor: 2.419

9.  Vibrational signature of charge solvation vs salt bridge isomers of sodiated amino acids in the gas phase.

Authors:  Catherine Kapota; Joël Lemaire; Philippe Maître; Gilles Ohanessian
Journal:  J Am Chem Soc       Date:  2004-02-18       Impact factor: 15.419

10.  Determination of active hydrogen content by fast atom bombardment mass spectrometry following hydrogen-deuterium exchange.

Authors:  S K Sethi; D L Smith; J A McCloskey
Journal:  Biochem Biophys Res Commun       Date:  1983-04-15       Impact factor: 3.575

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  5 in total

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Authors:  J Larry Campbell; Amy Meng-Ci Yang; Luke R Melo; W Scott Hopkins
Journal:  J Am Soc Mass Spectrom       Date:  2016-04-19       Impact factor: 3.109

2.  Highly dynamic motion of crown ethers along oligolysine peptide chains.

Authors:  Dominik P Weimann; Henrik D F Winkler; Jessica A Falenski; Beate Koksch; Christoph A Schalley
Journal:  Nat Chem       Date:  2009-08-30       Impact factor: 24.427

3.  Competing noncovalent host-guest interactions and H/D exchange: reactions of benzyloxycarbonyl-proline glycine dipeptide variants with ND3.

Authors:  Mahsan Miladi; Abayomi D Olaitan; Behrooz Zekavat; Touradj Solouki
Journal:  J Am Soc Mass Spectrom       Date:  2015-08-21       Impact factor: 3.109

4.  On the zwitterionic nature of gas-phase peptides and protein ions.

Authors:  Roberto Marchese; Rita Grandori; Paolo Carloni; Simone Raugei
Journal:  PLoS Comput Biol       Date:  2010-05-06       Impact factor: 4.475

5.  Infrared Multiple Photon Dissociation Spectroscopy of Cationized Canavanine: Side-Chain Substitution Influences Gas-Phase Zwitterion Formation.

Authors:  Zachary M Smith; Vincent Steinmetz; Jonathan Martens; Jos Oomens; John C Poutsma
Journal:  Int J Mass Spectrom       Date:  2017-09-04       Impact factor: 1.986

  5 in total

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