Literature DB >> 16862124

Protein flexibility acclimatizes photosynthetic energy conversion to the ambient temperature.

Oksana Shlyk-Kerner1, Ilan Samish, David Kaftan, Neta Holland, P S Maruthi Sai, Hadar Kless, Avigdor Scherz.   

Abstract

Adjustment of catalytic activity in response to diverse ambient temperatures is fundamental to life on Earth. A crucial example of this is photosynthesis, where solar energy is converted into electrochemical potential that drives oxygen and biomass generation at temperatures ranging from those of frigid Antarctica to those of scalding hot springs. The energy conversion proceeds by concerted mobilization of electrons and protons on photoexcitation of reaction centre protein complexes. Following physicochemical paradigms, the rates of imperative steps in this process were predicted to increase exponentially with rising temperatures, resulting in different yields of solar energy conversion at the distinct growth temperatures of photosynthetic mesophiles and extremophiles. In contrast, here we show a meticulous adjustment of energy conversion rate, resulting in similar yields from mesophiles and thermophiles. The key molecular players in the temperature adjustment process consist of a cluster of hitherto unrecognized protein cavities and an adjacent packing motif that jointly impart local flexibility crucial to the reaction centre proteins. Mutations within the packing motif of mesophiles that increase the bulkiness of the amino-acid side chains, and thus reduce the size of the cavities, promote thermophilic behaviour. This novel biomechanical mechanism accounts for the slowing of the catalytic reaction above physiological temperatures in contradiction to the classical Arrhenius paradigm. The mechanism provides new guidelines for manipulating the acclimatization of enzymes to the ambient temperatures of diverse habitats. More generally, it reveals novel protein elements that are of potential significance for modulating structure-activity relationships in membrane and globular proteins alike.

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Year:  2006        PMID: 16862124     DOI: 10.1038/nature04947

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  19 in total

Review 1.  Life at low temperatures: is disorder the driving force?

Authors:  Georges Feller
Journal:  Extremophiles       Date:  2006-12-08       Impact factor: 2.395

Review 2.  D1-protein dynamics in photosystem II: the lingering enigma.

Authors:  Marvin Edelman; Autar K Mattoo
Journal:  Photosynth Res       Date:  2008-08-16       Impact factor: 3.573

Review 3.  Photosystem II: The machinery of photosynthetic water splitting.

Authors:  Gernot Renger; Thomas Renger
Journal:  Photosynth Res       Date:  2008-10-01       Impact factor: 3.573

4.  Characterization of two thermostable cyanobacterial phytochromes reveals global movements in the chromophore-binding domain during photoconversion.

Authors:  Andrew T Ulijasz; Gabriel Cornilescu; David von Stetten; Steve Kaminski; Maria Andrea Mroginski; Junrui Zhang; Devaki Bhaya; Peter Hildebrandt; Richard D Vierstra
Journal:  J Biol Chem       Date:  2008-05-14       Impact factor: 5.157

5.  Sequence-based analysis of protein energy landscapes reveals nonuniform thermal adaptation within the proteome.

Authors:  Jenny Gu; Vincent J Hilser
Journal:  Mol Biol Evol       Date:  2009-07-10       Impact factor: 16.240

6.  Structural differences between thermophilic and mesophilic membrane proteins.

Authors:  Alejandro D Meruelo; Seong Kyu Han; Sanguk Kim; James U Bowie
Journal:  Protein Sci       Date:  2012-11       Impact factor: 6.725

Review 7.  The nonheme iron in photosystem II.

Authors:  Frank Müh; Athina Zouni
Journal:  Photosynth Res       Date:  2013-10       Impact factor: 3.573

8.  Molecular dynamics simulations on the aggregation behavior of indole type organic dye molecules in dye-sensitized solar cells.

Authors:  Ananda Rama Krishnan Selvaraj; Shuji Hayase
Journal:  J Mol Model       Date:  2011-09-09       Impact factor: 1.810

9.  An Aromatic Cap Seals the Substrate Binding Site in an ECF-Type S Subunit for Riboflavin.

Authors:  Nathan K Karpowich; Jinmei Song; Da-Neng Wang
Journal:  J Mol Biol       Date:  2016-06-13       Impact factor: 5.469

10.  Light-adapted charge-separated state of photosystem II: structural and functional dynamics of the closed reaction center.

Authors:  G Bor Sipka; Melinda Magyar; Alberto Mezzetti; Parveen Akhtar; Qingjun Zhu; Yanan Xiao; Guangye Han; Stefano Santabarbara; Jian-Ren Shen; Petar H Lambrev; Győző Garab
Journal:  Plant Cell       Date:  2021-05-31       Impact factor: 11.277

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