Literature DB >> 11193291

Cold adapted enzymes.

A O Smalås1, H K Leiros, V Os, N P Willassen.   

Abstract

The number of reports on enzymes from cold adapted organisms has increased significantly over the past years, and reveals that adaptive strategies for functioning at low temperature varies among enzymes. However, the high catalytic efficiency at low temperature seems, for the majority of cold active enzymes, to be accompanied by a reduced thermal stability. Increased molecular flexibility to compensate for the low working temperature, is therefore still the most dominating theory for cold adaptation, although there also seem to be other adaptive strategies. The number of experimentally determined 3D structures of enzymes possessing cold adaptation features is still limited, and restricts a structural rationalization for cold activity. The present summary of structural characteristics, based on comparative studies on crystal structures (7), homology models (7), and amino acid sequences (24), reveals that there are no common structural feature that can account for the low stability, increased catalytic efficiency, and proposed molecular flexibility. Analysis of structural features that are thought to be important for stability (e.g. intra-molecular hydrogen bonds and ion-pairs, proline-, methionine-, glycine-, or arginine content, surface hydrophilicity, helix stability, core packing), indicates that each cold adapted enzyme or enzyme system use different small selections of structural adjustments for gaining increased molecular flexibility that in turn give rise to increased catalytic efficiency and reduced stability. Nevertheless, there seem to be a clear correlation between cold adaptation and reduced number of interactions between structural domains or subunits. Cold active enzymes also seem, to a large extent, to increase their catalytic activity by optimizing the electrostatics at and around the active site.

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Year:  2000        PMID: 11193291     DOI: 10.1016/s1387-2656(00)06018-x

Source DB:  PubMed          Journal:  Biotechnol Annu Rev        ISSN: 1387-2656


  54 in total

Review 1.  Molecular basis of cold adaptation.

Authors:  Salvino D'Amico; Paule Claverie; Tony Collins; Daphné Georlette; Emmanuelle Gratia; Anne Hoyoux; Marie-Alice Meuwis; Georges Feller; Charles Gerday
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-07-29       Impact factor: 6.237

2.  Kinetic and structural optimization to catalysis at low temperatures in a psychrophilic cellulase from the Antarctic bacterium Pseudoalteromonas haloplanktis.

Authors:  Geneviève Garsoux; Josette Lamotte; Charles Gerday; Georges Feller
Journal:  Biochem J       Date:  2004-12-01       Impact factor: 3.857

3.  Trypsin specificity as elucidated by LIE calculations, X-ray structures, and association constant measurements.

Authors:  Hanna-Kirsti Schrøder Leiros; Bjørn Olav Brandsdal; Ole Andreas Andersen; Vibeke Os; Ingar Leiros; Ronny Helland; Jacek Otlewski; Nils Peder Willassen; Arne O Smalås
Journal:  Protein Sci       Date:  2004-04       Impact factor: 6.725

Review 4.  Atlantic cod trypsins: from basic research to practical applications.

Authors:  Agústa Gudmundsdóttir; Helga Margrét Pálsdóttir
Journal:  Mar Biotechnol (NY)       Date:  2005-02-17       Impact factor: 3.619

5.  Cloning and expression of PPAR-gamma and PGC-1alpha from the hibernating ground squirrel, Spermophilus tridecemlineatus.

Authors:  Sean F Eddy; Pier Morin; Kenneth B Storey
Journal:  Mol Cell Biochem       Date:  2005-01       Impact factor: 3.396

6.  Molecular adaptation in the ice worm, Mesenchytraeus solifugus: divergence of energetic-associated genes.

Authors:  Angela H Farrell; Kristi A Hohenstein; Daniel H Shain
Journal:  J Mol Evol       Date:  2004-11       Impact factor: 2.395

7.  Four kingdoms on glacier ice: convergent energetic processes boost energy levels as temperatures fall.

Authors:  Michael J Napolitano; Daniel H Shain
Journal:  Proc Biol Sci       Date:  2004-08-07       Impact factor: 5.349

Review 8.  Life at low temperatures: is disorder the driving force?

Authors:  Georges Feller
Journal:  Extremophiles       Date:  2006-12-08       Impact factor: 2.395

Review 9.  Coping with our cold planet.

Authors:  Debora Frigi Rodrigues; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2008-01-18       Impact factor: 4.792

10.  Thirty-degree shift in optimum temperature of a thermophilic lipase by a single-point mutation: effect of serine to threonine mutation on structural flexibility.

Authors:  Monika Sharma; Rakesh Kumar; Ranvir Singh; Jagdeep Kaur
Journal:  Mol Cell Biochem       Date:  2017-02-11       Impact factor: 3.396

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