Literature DB >> 16980326

Optimized extraction of glycosaminoglycans from normal and osteoarthritic cartilage for glycomics profiling.

Alicia M Hitchcock1, Karen E Yates, Sonya Shortkroff, Catherine E Costello, Joseph Zaia.   

Abstract

Articular cartilage is a highly specialized smooth connective tissue whose proper functioning depends on the maintenance of an extracellular matrix consisting of an integrated assembly of collagens, glycoproteins, proteoglycans (PG), and glycosaminoglycans. Isomeric chondroitin sulfate glycoforms differing in position and degree of sulfation and uronic acid epimerization play specific and distinct functional roles during development and disease onset. This work introduces a novel glycosaminoglycan extraction method for the quantification of mixtures of chondroitin sulfate oligosaccharides from intact cartilage tissue for mass spectral analysis. Glycosaminoglycans were extracted from intact cartilage samples using a combination of ethanol precipitation and enzymatic release followed by reversed-phase and strong anion exchange solid-phase extraction steps. Extracted chondroitin sulfate glycosaminoglycans were partially depolymerized using chondroitinases, labeled with 2-anthranilic acid-d(4) (2-AA) and subjected to size exclusion chromatography with online electrospray ionization mass spectrometric detection in the negative ion mode. The method presented herein enabled simultaneous determination of sulfate position and uronic acid epimerization in juvenile bovine and adult human cartilage samples. The method was applied to a series of 13 adult human cartilage explants. Standard deviation of the mean for the measurements was 1.6 on average. Coefficients of variation were approximately 4% for all compositions of 40% or greater. These results show that the new method has sufficient accuracy to allow determination of topographical distribution of glycoforms in connective tissue.

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Year:  2006        PMID: 16980326      PMCID: PMC2630472          DOI: 10.1093/glycob/cwl046

Source DB:  PubMed          Journal:  Glycobiology        ISSN: 0959-6658            Impact factor:   4.313


  58 in total

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  28 in total

1.  Reliable LC-MS quantitative glycomics using iGlycoMab stable isotope labeled glycans as internal standards.

Authors:  Shiyue Zhou; Nadia Tello; Alex Harvey; Barry Boyes; Ron Orlando; Yehia Mechref
Journal:  Electrophoresis       Date:  2016-04-09       Impact factor: 3.535

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Authors:  Joseph Zaia
Journal:  Chem Biol       Date:  2008-09-22

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Authors:  Wei Wei; Rebecca L Miller; Julie A Leary
Journal:  Anal Chem       Date:  2013-05-28       Impact factor: 6.986

5.  Quantitative Glycomics: A Combined Analytical and Bioinformatics Approach.

Authors:  L Veillon; S Zhou; Y Mechref
Journal:  Methods Enzymol       Date:  2017-01-09       Impact factor: 1.600

Review 6.  Quantitative glycomics strategies.

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Journal:  Mol Cell Proteomics       Date:  2013-01-16       Impact factor: 5.911

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Authors:  Yuqing Chang; Bo Yang; Amanda Weyers; Robert J Linhardt
Journal:  Methods Mol Biol       Date:  2013

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Journal:  Anal Chem       Date:  2010-01-15       Impact factor: 6.986

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Journal:  Mass Spectrom Rev       Date:  2009 Mar-Apr       Impact factor: 10.946

10.  Evolutionary differences in glycosaminoglycan fine structure detected by quantitative glycan reductive isotope labeling.

Authors:  Roger Lawrence; Sara K Olson; Robert E Steele; Lianchun Wang; Rahul Warrior; Richard D Cummings; Jeffrey D Esko
Journal:  J Biol Chem       Date:  2008-09-24       Impact factor: 5.157

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