Literature DB >> 16953792

Chromatin insulators.

Lourdes Valenzuela1, Rohinton T Kamakaka.   

Abstract

Active and silenced chromatin domains are often in close juxtaposition to one another, and enhancer and silencer elements operate over large distances to regulate the genes in these domains. The lack of promiscuity in the function of these elements suggests that active mechanisms exist to restrict their activity. Insulators are DNA elements that restrict the effects of long-range regulatory elements. Studies on different insulators from different organisms have identified common themes in their mode of action. Numerous insulators map to promoters of genes or have binding sites for transcription factors and like active chromatin hubs and silenced loci, insulators also cluster in the nucleus. These results bring into focus potential conserved mechanisms by which these elements might function in the nucleus.

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Year:  2006        PMID: 16953792     DOI: 10.1146/annurev.genet.39.073003.113546

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  115 in total

1.  Theoretical analysis of the role of chromatin interactions in long-range action of enhancers and insulators.

Authors:  Swagatam Mukhopadhyay; Paul Schedl; Vasily M Studitsky; Anirvan M Sengupta
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-28       Impact factor: 11.205

2.  Learning about genomics and disease from the anucleate human red blood cell.

Authors:  Edward J Benz
Journal:  J Clin Invest       Date:  2010-11-22       Impact factor: 14.808

3.  Mechanism of chromosomal boundary action: roadblock, sink, or loop?

Authors:  Daryl Gohl; Tsutomu Aoki; Jason Blanton; Greg Shanower; Gretchen Kappes; Paul Schedl
Journal:  Genetics       Date:  2010-12-31       Impact factor: 4.562

4.  Roles of DNA looping in enhancer-blocking activity.

Authors:  Naoko Tokuda; Masaki Sasai; George Chikenji
Journal:  Biophys J       Date:  2011-01-05       Impact factor: 4.033

Review 5.  Nucleolar DNA: the host and the guests.

Authors:  E Smirnov; D Cmarko; T Mazel; M Hornáček; I Raška
Journal:  Histochem Cell Biol       Date:  2016-02-04       Impact factor: 4.304

6.  Genomic regulatory blocks underlie extensive microsynteny conservation in insects.

Authors:  Pär G Engström; Shannan J Ho Sui; Oyvind Drivenes; Thomas S Becker; Boris Lenhard
Journal:  Genome Res       Date:  2007-11-07       Impact factor: 9.043

7.  Regulated expression of the human gastrin gene in mice.

Authors:  Edith Mensah-Osman; Ed Labut; Yana Zavros; Mohamad El-Zaatari; David J Law; Juanita L Merchant
Journal:  Regul Pept       Date:  2008-03-28

8.  Human gamma-satellite DNA maintains open chromatin structure and protects a transgene from epigenetic silencing.

Authors:  Jung-Hyun Kim; Thomas Ebersole; Natalay Kouprina; Vladimir N Noskov; Jun-Ichirou Ohzeki; Hiroshi Masumoto; Brankica Mravinac; Beth A Sullivan; Adam Pavlicek; Sinisa Dovat; Svetlana D Pack; Yoo-Wook Kwon; Patrick T Flanagan; Dmitri Loukinov; Victor Lobanenkov; Vladimir Larionov
Journal:  Genome Res       Date:  2009-01-13       Impact factor: 9.043

9.  E(y)2/Sus1 is required for blocking PRE silencing by the Wari insulator in Drosophila melanogaster.

Authors:  Maksim Erokhin; Alexander Parshikov; Pavel Georgiev; Darya Chetverina
Journal:  Chromosoma       Date:  2010-01-15       Impact factor: 4.316

Review 10.  Chromatin insulators: regulatory mechanisms and epigenetic inheritance.

Authors:  Ashley M Bushey; Elizabeth R Dorman; Victor G Corces
Journal:  Mol Cell       Date:  2008-10-10       Impact factor: 17.970

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