Literature DB >> 17616589

The mutT defect does not elevate chromosomal fragmentation in Escherichia coli because of the surprisingly low levels of MutM/MutY-recognized DNA modifications.

Ella Rotman1, Andrei Kuzminov.   

Abstract

Nucleotide pool sanitizing enzymes Dut (dUTPase), RdgB (dITPase), and MutT (8-oxo-dGTPase) of Escherichia coli hydrolyze noncanonical DNA precursors to prevent incorporation of base analogs into DNA. Previous studies reported dramatic AT-->CG mutagenesis in mutT mutants, suggesting a considerable density of 8-oxo-G in DNA that should cause frequent excision and chromosomal fragmentation, irreparable in the absence of RecBCD-catalyzed repair and similar to the lethality of dut recBC and rdgB recBC double mutants. In contrast, we found mutT recBC double mutants viable with no signs of chromosomal fragmentation. Overproduction of the MutM and MutY DNA glycosylases, both acting on DNA containing 8-oxo-G, still yields no lethality in mutT recBC double mutants. Plasmid DNA, extracted from mutT mutM double mutant cells and treated with MutM in vitro, shows no increased relaxation, indicating no additional 8-oxo-G modifications. Our DeltamutT allele elevates the AT-->CG transversion rate 27,000-fold, consistent with published reports. However, the rate of AT-->CG transversions in our mutT(+) progenitor strain is some two orders of magnitude lower than in previous studies, which lowers the absolute rate of mutagenesis in DeltamutT derivatives, translating into less than four 8-oxo-G modifications per genome equivalent, which is too low to cause the expected effects. Introduction of various additional mutations in the DeltamutT strain or treatment with oxidative agents failed to increase the mutagenesis even twofold. We conclude that, in contrast to the previous studies, there is not enough 8-oxo-G in the DNA of mutT mutants to cause elevated excision repair that would trigger chromosomal fragmentation.

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Year:  2007        PMID: 17616589      PMCID: PMC2045204          DOI: 10.1128/JB.00776-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  84 in total

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Journal:  J Mol Biol       Date:  1977-12-05       Impact factor: 5.469

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Journal:  J Biol Chem       Date:  1977-05-25       Impact factor: 5.157

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Authors:  T Lindahl; B Nyberg
Journal:  Biochemistry       Date:  1974-07-30       Impact factor: 3.162

4.  In vivo studies of temperature-sensitive recB and recC mutants.

Authors:  S R Kushner
Journal:  J Bacteriol       Date:  1974-12       Impact factor: 3.490

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Authors:  E C Cox; C Yanofsky
Journal:  J Bacteriol       Date:  1969-10       Impact factor: 3.490

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Authors:  N S Willetts; A J Clark
Journal:  J Bacteriol       Date:  1969-10       Impact factor: 3.490

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Authors:  E B Konrad; I R Lehman
Journal:  Proc Natl Acad Sci U S A       Date:  1975-06       Impact factor: 11.205

8.  Interaction of deoxyinosine 3'-endonuclease from Escherichia coli with DNA containing deoxyinosine.

Authors:  M Yao; Y W Kow
Journal:  J Biol Chem       Date:  1995-12-01       Impact factor: 5.157

9.  Lethality of rep recB and rep recC double mutants of Escherichia coli.

Authors:  M Uzest; S D Ehrlich; B Michel
Journal:  Mol Microbiol       Date:  1995-09       Impact factor: 3.501

10.  An N-glycosidase from Escherichia coli that releases free uracil from DNA containing deaminated cytosine residues.

Authors:  T Lindahl
Journal:  Proc Natl Acad Sci U S A       Date:  1974-09       Impact factor: 11.205

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  12 in total

1.  Thymineless Death in Escherichia coli Is Unaffected by Chromosomal Replication Complexity.

Authors:  Sharik R Khan; Andrei Kuzminov
Journal:  J Bacteriol       Date:  2019-04-09       Impact factor: 3.490

2.  Mutation rate dynamics in a bacterial population reflect tension between adaptation and genetic load.

Authors:  Sébastien Wielgoss; Jeffrey E Barrick; Olivier Tenaillon; Michael J Wiser; W James Dittmar; Stéphane Cruveiller; Béatrice Chane-Woon-Ming; Claudine Médigue; Richard E Lenski; Dominique Schneider
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-17       Impact factor: 11.205

3.  Antibiotic killing through oxidized nucleotides.

Authors:  Aviram Rasouly; Evgeny Nudler
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-14       Impact factor: 11.205

4.  Oxidation of the guanine nucleotide pool underlies cell death by bactericidal antibiotics.

Authors:  James J Foti; Babho Devadoss; Jonathan A Winkler; James J Collins; Graham C Walker
Journal:  Science       Date:  2012-04-20       Impact factor: 47.728

5.  Replication fork inhibition in seqA mutants of Escherichia coli triggers replication fork breakage.

Authors:  Ella Rotman; Sharik R Khan; Elena Kouzminova; Andrei Kuzminov
Journal:  Mol Microbiol       Date:  2014-05-23       Impact factor: 3.501

6.  Polyphosphate accumulation in Escherichia coli in response to defects in DNA metabolism.

Authors:  Luciana Amado; Andrei Kuzminov
Journal:  J Bacteriol       Date:  2009-10-16       Impact factor: 3.490

7.  Elevated Levels of DNA Strand Breaks Induced by a Base Analog in the Human Cell Line with the P32T ITPA Variant.

Authors:  Irina S-R Waisertreiger; Miriam R Menezes; James Randazzo; Youri I Pavlov
Journal:  J Nucleic Acids       Date:  2010-09-26

8.  Reduced lipopolysaccharide phosphorylation in Escherichia coli lowers the elevated ori/ter ratio in seqA mutants.

Authors:  Ella Rotman; Preston Bratcher; Andrei Kuzminov
Journal:  Mol Microbiol       Date:  2009-04-30       Impact factor: 3.501

9.  Cyanide, peroxide and nitric oxide formation in solutions of hydroxyurea causes cellular toxicity and may contribute to its therapeutic potency.

Authors:  Kawai J Kuong; Andrei Kuzminov
Journal:  J Mol Biol       Date:  2009-05-23       Impact factor: 5.469

10.  Substrate ambiguity among the nudix hydrolases: biologically significant, evolutionary remnant, or both?

Authors:  Alexander G McLennan
Journal:  Cell Mol Life Sci       Date:  2012-11-27       Impact factor: 9.261

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