Literature DB >> 16867988

The first catalytic step of the light-driven enzyme protochlorophyllide oxidoreductase proceeds via a charge transfer complex.

Derren J Heyes1, Peter Heathcote, Stephen E J Rigby, Miguel A Palacios, Rienk van Grondelle, C Neil Hunter.   

Abstract

In chlorophyll biosynthesis protochlorophyllide reductase (POR) catalyzes the light-driven reduction of protochlorophyllide (Pchlide) to chlorophyllide, providing a rare opportunity to trap and characterize catalytic intermediates at low temperatures. Moreover, the presence of a chlorophyll-like molecule allows the use of EPR, electron nuclear double resonance, and Stark spectroscopies, previously used for the analysis of photosynthetic systems, to follow catalytic events in the active site of POR. Different models involving the formation of either radical species or charge transfer complexes have been proposed for the initial photochemical step, which forms a nonfluorescent intermediate absorbing at 696 nm (A696). Our EPR data show that the concentration of the radical species formed in the initial photochemical step is not stoichiometric with conversion of substrate. Instead, a large Stark effect, indicative of charge transfer character, is associated with A696. Two components were required to fit the Stark data, providing clear evidence that charge transfer complexes are formed during the initial photochemistry. The temperature dependences of both A696 formation and NADPH oxidation are identical, and we propose that formation of the A696 state involves hydride transfer from NADPH to form a charge transfer complex. A catalytic mechanism of POR is suggested in which Pchlide absorbs a photon, creating a transient charge separation across the C-17-C-18 double bond, which promotes ultrafast hydride transfer from the pro-S face of NADPH to the C-17 of Pchlide. The resulting A696 charge transfer intermediate facilitates transfer of a proton to the C-18 of Pchlide during the subsequent first "dark" reaction.

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Year:  2006        PMID: 16867988     DOI: 10.1074/jbc.M602943200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  17 in total

1.  Simultaneous measurements of solvent dynamics and functional kinetics in a light-activated enzyme.

Authors:  Guillaume Durin; Aude Delaunay; Claudine Darnault; Derren J Heyes; Antoine Royant; Xavier Vernede; C Neil Hunter; Martin Weik; Dominique Bourgeois
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

Review 2.  Photocatalysis as the 'master switch' of photomorphogenesis in early plant development.

Authors:  Derren J Heyes; Shaowei Zhang; Aoife Taylor; Linus O Johannissen; Samantha J O Hardman; Sam Hay; Nigel S Scrutton
Journal:  Nat Plants       Date:  2021-03-08       Impact factor: 15.793

3.  COBRAMM 2.0 - A software interface for tailoring molecular electronic structure calculations and running nanoscale (QM/MM) simulations.

Authors:  Oliver Weingart; Artur Nenov; Piero Altoè; Ivan Rivalta; Javier Segarra-Martí; Irina Dokukina; Marco Garavelli
Journal:  J Mol Model       Date:  2018-09-03       Impact factor: 1.810

4.  A twin-track approach has optimized proton and hydride transfer by dynamically coupled tunneling during the evolution of protochlorophyllide oxidoreductase.

Authors:  Derren J Heyes; Colin Levy; Michiyo Sakuma; David L Robertson; Nigel S Scrutton
Journal:  J Biol Chem       Date:  2011-02-11       Impact factor: 5.157

5.  Plant Protochlorophyllide Oxidoreductases A and B: CATALYTIC EFFICIENCY AND INITIAL REACTION STEPS.

Authors:  Alessio Garrone; Nataliya Archipowa; Peter F Zipfel; Gudrun Hermann; Benjamin Dietzek
Journal:  J Biol Chem       Date:  2015-09-25       Impact factor: 5.157

6.  Mutagenesis alters the catalytic mechanism of the light-driven enzyme protochlorophyllide oxidoreductase.

Authors:  Binuraj R K Menon; Paul A Davison; C Neil Hunter; Nigel S Scrutton; Derren J Heyes
Journal:  J Biol Chem       Date:  2009-10-22       Impact factor: 5.157

7.  Cryogenic and laser photoexcitation studies identify multiple roles for active site residues in the light-driven enzyme protochlorophyllide oxidoreductase.

Authors:  Binuraj R K Menon; Jonathan P Waltho; Nigel S Scrutton; Derren J Heyes
Journal:  J Biol Chem       Date:  2009-05-13       Impact factor: 5.157

8.  Crystal structures of cyanobacterial light-dependent protochlorophyllide oxidoreductase.

Authors:  Chen-Song Dong; Wei-Lun Zhang; Qiao Wang; Yu-Shuai Li; Xiao Wang; Min Zhang; Lin Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-31       Impact factor: 11.205

9.  Photocatalytic LPOR forms helical lattices that shape membranes for chlorophyll synthesis.

Authors:  Henry C Nguyen; Michal Gabruk; Arthur A Melo; Jerzy Kruk; Adam Frost
Journal:  Nat Plants       Date:  2021-04-19       Impact factor: 15.793

10.  Mechanistic reappraisal of early stage photochemistry in the light-driven enzyme protochlorophyllide oxidoreductase.

Authors:  Derren J Heyes; Samantha J O Hardman; David Mansell; John M Gardiner; Nigel S Scrutton
Journal:  PLoS One       Date:  2012-09-26       Impact factor: 3.240

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