Literature DB >> 16829579

Hydrogen-bond switching through a radical pair mechanism in a flavin-binding photoreceptor.

Magdalena Gauden1, Ivo H M van Stokkum, Jason M Key, Daniel Ch Lührs, Rienk van Grondelle, Peter Hegemann, John T M Kennis.   

Abstract

BLUF (blue light sensing using FAD) domains constitute a recently discovered class of photoreceptor proteins found in bacteria and eukaryotic algae, where they control a range of physiological responses including photosynthesis gene expression, photophobia, and negative phototaxis. Other than in well known photoreceptors such as the rhodopsins and phytochromes, BLUF domains are sensitive to light through an oxidized flavin rather than an isomerizable cofactor. To understand the physicochemical basis of BLUF domain photoactivation, we have applied femtosecond transient absorption spectroscopy to the Slr1694 BLUF domain of Synechocystis PCC6803. We show that photoactivation of BLUF domains proceeds by means of a radical-pair mechanism, driven by electron and proton transfer from the protein to the flavin, resulting in the transient formation of anionic and neutral flavin radical species that finally result in the long-lived signaling state on a 100-ps timescale. A pronounced deuteration effect is observed on the lifetimes of the intermediate radical species, indicating that proton movements underlie their molecular transformations. We propose a photoactivation mechanism that involves a successive rupture of hydrogen bonds between a conserved tyrosine and glutamine by light-induced electron transfer from tyrosine to flavin and between the glutamine and flavin by subsequent protonation at flavin N5. These events allow a reorientation of the conserved glutamine, resulting in a switching of the hydrogen-bond network connecting the chromophore to the protein, followed by radical-pair recombination, which locks the glutamine in place. It is suggested that the redox potential of flavin generally defines the light sensitivity of flavin-binding photoreceptors.

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Year:  2006        PMID: 16829579      PMCID: PMC1544145          DOI: 10.1073/pnas.0600720103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

Review 1.  Mechanisms of flavoprotein-catalyzed reactions.

Authors:  S Ghisla; V Massey
Journal:  Eur J Biochem       Date:  1989-04-15

2.  Uncovering the hidden ground state of green fluorescent protein.

Authors:  John T M Kennis; Delmar S Larsen; Ivo H M van Stokkum; Mikas Vengris; Jasper J van Thor; Rienk van Grondelle
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-17       Impact factor: 11.205

3.  Spectroscopic analysis of the dark relaxation process of a photocycle in a sensor of blue light using FAD (BLUF) protein Slr1694 of the cyanobacterium Synechocystis sp. PCC6803.

Authors:  Koji Hasegawa; Shinji Masuda; Taka-Aki Ono
Journal:  Plant Cell Physiol       Date:  2005-01-19       Impact factor: 4.927

4.  Time-resolved spectroscopic studies of the AppA blue-light receptor BLUF domain from Rhodobacter sphaeroides.

Authors:  Vladimira Dragnea; Matthias Waegele; Septimiu Balascuta; Carl Bauer; Bogdan Dragnea
Journal:  Biochemistry       Date:  2005-12-13       Impact factor: 3.162

5.  On the mechanism of activation of the BLUF domain of AppA.

Authors:  Wouter Laan; Magdalena Gauden; Sergey Yeremenko; Rienk van Grondelle; John T M Kennis; Klaas J Hellingwerf
Journal:  Biochemistry       Date:  2006-01-10       Impact factor: 3.162

6.  Light-induced electron transfer in Arabidopsis cryptochrome-1 correlates with in vivo function.

Authors:  Anke Zeugner; Martin Byrdin; Jean-Pierre Bouly; Nadia Bakrim; Baldissera Giovani; Klaus Brettel; Margaret Ahmad
Journal:  J Biol Chem       Date:  2005-03-17       Impact factor: 5.157

7.  Structure of a novel photoreceptor, the BLUF domain of AppA from Rhodobacter sphaeroides.

Authors:  Spencer Anderson; Vladimira Dragnea; Shinji Masuda; Joel Ybe; Keith Moffat; Carl Bauer
Journal:  Biochemistry       Date:  2005-06-07       Impact factor: 3.162

8.  Structure of a cyanobacterial BLUF protein, Tll0078, containing a novel FAD-binding blue light sensor domain.

Authors:  Akiko Kita; Koji Okajima; Yukio Morimoto; Masahiko Ikeuchi; Kunio Miki
Journal:  J Mol Biol       Date:  2005-04-09       Impact factor: 5.469

9.  Photocycle of the flavin-binding photoreceptor AppA, a bacterial transcriptional antirepressor of photosynthesis genes.

Authors:  Magdalena Gauden; Sergey Yeremenko; Wouter Laan; Ivo H M van Stokkum; Janne A Ihalainen; Rienk van Grondelle; Klaas J Hellingwerf; John T M Kennis
Journal:  Biochemistry       Date:  2005-03-15       Impact factor: 3.162

10.  Structure of a bacterial BLUF photoreceptor: insights into blue light-mediated signal transduction.

Authors:  Astrid Jung; Tatiana Domratcheva; Marina Tarutina; Qiong Wu; Wen-Huang Ko; Robert L Shoeman; Mark Gomelsky; Kevin H Gardner; Ilme Schlichting
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-17       Impact factor: 11.205

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  58 in total

1.  Electronic and protein structural dynamics of a photosensory histidine kinase.

Authors:  Maxime T A Alexandre; Erin B Purcell; Rienk van Grondelle; Bruno Robert; John T M Kennis; Sean Crosson
Journal:  Biochemistry       Date:  2010-06-15       Impact factor: 3.162

2.  Coupling between the BLUF and EAL domains in the blue light-regulated phosphodiesterase BlrP1.

Authors:  Maria Khrenova; Tatiana Domratcheva; Bella Grigorenko; Alexander Nemukhin
Journal:  J Mol Model       Date:  2010-09-14       Impact factor: 1.810

3.  Light-induced hydrogen bonding pattern and driving force of electron transfer in AppA BLUF domain photoreceptor.

Authors:  Hiroshi Ishikita
Journal:  J Biol Chem       Date:  2008-07-21       Impact factor: 5.157

4.  PixE promotes dark oligomerization of the BLUF photoreceptor PixD.

Authors:  Hua Yuan; Carl E Bauer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-11       Impact factor: 11.205

5.  Equilibrium and ultrafast kinetic studies manipulating electron transfer: A short-lived flavin semiquinone is not sufficient for electron bifurcation.

Authors:  John P Hoben; Carolyn E Lubner; Michael W Ratzloff; Gerrit J Schut; Diep M N Nguyen; Karl W Hempel; Michael W W Adams; Paul W King; Anne-Frances Miller
Journal:  J Biol Chem       Date:  2017-06-14       Impact factor: 5.157

6.  Primary reactions of the LOV2 domain of phototropin studied with ultrafast mid-infrared spectroscopy and quantum chemistry.

Authors:  Maxime T A Alexandre; Tatiana Domratcheva; Cosimo Bonetti; Luuk J G W van Wilderen; Rienk van Grondelle; Marie-Louise Groot; Klaas J Hellingwerf; John T M Kennis
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

7.  Characterization of a cold-adapted DNA photolyase from C. psychrerythraea 34H.

Authors:  Sudipto Munshi; Ananthi Rajamoorthi; Robert J Stanley
Journal:  Extremophiles       Date:  2017-07-19       Impact factor: 2.395

Review 8.  Seeing the light with BLUF proteins.

Authors:  Sam-Yong Park; Jeremy R H Tame
Journal:  Biophys Rev       Date:  2017-03-24

9.  A Robust Bioderived Wavelength-Specific Photosensor Based on BLUF Proteins.

Authors:  Jing Tong; Peng Zhang; Lei Zhang; Dongwei Zhang; David N Beratan; Haifeng Song; Yi Wang; Tie Li
Journal:  Sens Actuators B Chem       Date:  2020-02-06       Impact factor: 7.460

10.  Femtosecond dynamics of short-range protein electron transfer in flavodoxin.

Authors:  Ting-Fang He; Lijun Guo; Xunmin Guo; Chih-Wei Chang; Lijuan Wang; Dongping Zhong
Journal:  Biochemistry       Date:  2013-12-09       Impact factor: 3.162

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