Literature DB >> 16107542

Structure of a bacterial BLUF photoreceptor: insights into blue light-mediated signal transduction.

Astrid Jung1, Tatiana Domratcheva, Marina Tarutina, Qiong Wu, Wen-Huang Ko, Robert L Shoeman, Mark Gomelsky, Kevin H Gardner, Ilme Schlichting.   

Abstract

Light is an essential environmental factor, and many species have evolved the capability to respond to it. Blue light is perceived through three flavin-containing photoreceptor families: cryptochromes, light-oxygen-voltage, and BLUF (sensor of blue light using flavin adenine dinucleotide, FAD) domain proteins. BLUF domains are present in various proteins from Bacteria and lower Eukarya. They are fully modular and can relay signals to structurally and functionally diverse output units, most of which are implicated in nucleotide metabolism. We present the high resolution crystal structure of the dark resting state of BlrB, a short BLUF domain-containing protein from Rhodobacter sphaeroides. The structure reveals a previously uncharacterized FAD-binding fold. Along with other lines of evidence, it suggests mechanistic aspects for the photocycle that is characterized by a red-shifted absorbance of the flavin. The isoalloxazine ring of FAD binds in a cleft between two helices, whereas the adenine ring points into the solvent. We propose that the adenine ring serves as a hook mediating the interaction with its effector/output domain. The structure suggests a unique photochemical signaling switch in which the absorption of light induces a structural change in the rim surrounding the hook, thereby changing the protein interface between BLUF and the output domain.

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Year:  2005        PMID: 16107542      PMCID: PMC1194903          DOI: 10.1073/pnas.0500722102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

Review 1.  Redox and light regulation of gene expression in photosynthetic prokaryotes.

Authors:  Carl Bauer; Sylvie Elsen; Lee R Swem; Danielle L Swem; Shinji Masuda
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

2.  Spectroscopic and mutational analysis of the blue-light photoreceptor AppA: a novel photocycle involving flavin stacking with an aromatic amino acid.

Authors:  Brian J Kraft; Shinji Masuda; Jun Kikuchi; Vladimira Dragnea; Gordon Tollin; Jeffrey M Zaleski; Carl E Bauer
Journal:  Biochemistry       Date:  2003-06-10       Impact factor: 3.162

Review 3.  BLUF: a novel FAD-binding domain involved in sensory transduction in microorganisms.

Authors:  Mark Gomelsky; Gabriele Klug
Journal:  Trends Biochem Sci       Date:  2002-10       Impact factor: 13.807

4.  AppA is a blue light photoreceptor that antirepresses photosynthesis gene expression in Rhodobacter sphaeroides.

Authors:  Shinji Masuda; Carl E Bauer
Journal:  Cell       Date:  2002-09-06       Impact factor: 41.582

5.  The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: enzymatically active and inactive EAL domains.

Authors:  Andrew J Schmidt; Dmitri A Ryjenkov; Mark Gomelsky
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

6.  Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction.

Authors:  S Crosson; K Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

7.  Crystal structures and molecular mechanism of a light-induced signaling switch: The Phot-LOV1 domain from Chlamydomonas reinhardtii.

Authors:  Roman Fedorov; Ilme Schlichting; Elisabeth Hartmann; Tatjana Domratcheva; Markus Fuhrmann; Peter Hegemann
Journal:  Biophys J       Date:  2003-04       Impact factor: 4.033

8.  A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis.

Authors:  Mineo Iseki; Shigeru Matsunaga; Akio Murakami; Kaoru Ohno; Kiyoshi Shiga; Kazuichi Yoshida; Michizo Sugai; Tetsuo Takahashi; Terumitsu Hori; Masakatsu Watanabe
Journal:  Nature       Date:  2002-02-28       Impact factor: 49.962

9.  Structural basis of a phototropin light switch.

Authors:  Shannon M Harper; Lori C Neil; Kevin H Gardner
Journal:  Science       Date:  2003-09-12       Impact factor: 47.728

10.  A single flavoprotein, AppA, integrates both redox and light signals in Rhodobacter sphaeroides.

Authors:  Stephan Braatsch; Mark Gomelsky; Silke Kuphal; Gabriele Klug
Journal:  Mol Microbiol       Date:  2002-08       Impact factor: 3.501

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  53 in total

1.  Coupling between the BLUF and EAL domains in the blue light-regulated phosphodiesterase BlrP1.

Authors:  Maria Khrenova; Tatiana Domratcheva; Bella Grigorenko; Alexander Nemukhin
Journal:  J Mol Model       Date:  2010-09-14       Impact factor: 1.810

2.  Differential activation of Escherichia coli chemoreceptors by blue-light stimuli.

Authors:  Stuart Wright; Bharat Walia; John S Parkinson; Shahid Khan
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

3.  Crystal structures of the Synechocystis photoreceptor Slr1694 reveal distinct structural states related to signaling.

Authors:  Hua Yuan; Spencer Anderson; Shinji Masuda; Vladimira Dragnea; Keith Moffat; Carl Bauer
Journal:  Biochemistry       Date:  2006-10-24       Impact factor: 3.162

4.  Ecological genomics of marine Roseobacters.

Authors:  M A Moran; R Belas; M A Schell; J M González; F Sun; S Sun; B J Binder; J Edmonds; W Ye; B Orcutt; E C Howard; C Meile; W Palefsky; A Goesmann; Q Ren; I Paulsen; L E Ulrich; L S Thompson; E Saunders; A Buchan
Journal:  Appl Environ Microbiol       Date:  2007-05-25       Impact factor: 4.792

5.  PixE promotes dark oligomerization of the BLUF photoreceptor PixD.

Authors:  Hua Yuan; Carl E Bauer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-11       Impact factor: 11.205

6.  McVol - a program for calculating protein volumes and identifying cavities by a Monte Carlo algorithm.

Authors:  Mirco S Till; G Matthias Ullmann
Journal:  J Mol Model       Date:  2009-07-22       Impact factor: 1.810

Review 7.  Discovering functional novelty in metagenomes: examples from light-mediated processes.

Authors:  Amoolya H Singh; Tobias Doerks; Ivica Letunic; Jeroen Raes; Peer Bork
Journal:  J Bacteriol       Date:  2008-10-10       Impact factor: 3.490

Review 8.  Seeing the light with BLUF proteins.

Authors:  Sam-Yong Park; Jeremy R H Tame
Journal:  Biophys Rev       Date:  2017-03-24

9.  A Robust Bioderived Wavelength-Specific Photosensor Based on BLUF Proteins.

Authors:  Jing Tong; Peng Zhang; Lei Zhang; Dongwei Zhang; David N Beratan; Haifeng Song; Yi Wang; Tie Li
Journal:  Sens Actuators B Chem       Date:  2020-02-06       Impact factor: 7.460

10.  Short-Range Electron Transfer in Reduced Flavodoxin: Ultrafast Nonequilibrium Dynamics Coupled with Protein Fluctuations.

Authors:  Mainak Kundu; Ting-Fang He; Yangyi Lu; Lijuan Wang; Dongping Zhong
Journal:  J Phys Chem Lett       Date:  2018-05-11       Impact factor: 6.475

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