Literature DB >> 19580760

Primary reactions of the LOV2 domain of phototropin studied with ultrafast mid-infrared spectroscopy and quantum chemistry.

Maxime T A Alexandre1, Tatiana Domratcheva, Cosimo Bonetti, Luuk J G W van Wilderen, Rienk van Grondelle, Marie-Louise Groot, Klaas J Hellingwerf, John T M Kennis.   

Abstract

Phototropins, major blue-light receptors in plants, are sensitive to blue light through a pair of flavin mononucleotide (FMN)-binding light oxygen and voltage (LOV) domains, LOV1 and LOV2. LOV2 undergoes a photocycle involving light-driven covalent adduct formation between a conserved cysteine and the FMN C(4a) atom. Here, the primary reactions of Avena sativa phototropin 1 LOV2 (AsLOV2) were studied using ultrafast mid-infrared spectroscopy and quantum chemistry. The singlet excited state (S1) evolves into the triplet state (T1) with a lifetime of 1.5 ns at a yield of approximately 50%. The infrared signature of S1 is characterized by absorption bands at 1657 cm(-1), 1495-1415 cm(-1), and 1375 cm(-1). The T1 state shows infrared bands at 1657 cm(-1), 1645 cm(-1), 1491-1438 cm(-1), and 1390 cm(-1). For both electronic states, these bands are assigned principally to C=O, C=N, C-C, and C-N stretch modes. The overall downshifting of C=O and C=N bond stretch modes is consistent with an overall bond-order decrease of the conjugated isoalloxazine system upon a pi-pi* transition. The configuration interaction singles (CIS) method was used to calculate the vibrational spectra of the S1 and T1 excited pipi* states, as well as respective electronic energies, structural parameters, electronic dipole moments, and intrinsic force constants. The harmonic frequencies of S1 and T1, as calculated by the CIS method, are in satisfactory agreement with the evident band positions and intensities. On the other hand, CIS calculations of a T1 cation that was protonated at the N(5) site did not reproduce the experimental FMN T1 spectrum. We conclude that the FMN T1 state remains nonprotonated on a nanosecond timescale, which rules out an ionic mechanism for covalent adduct formation involving cysteine-N(5) proton transfer on this timescale. Finally, we observed a heterogeneous population of singly and doubly H-bonded FMN C(4)=O conformers in the dark state, with stretch frequencies at 1714 cm(-1) and 1694 cm(-1), respectively.

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Year:  2009        PMID: 19580760      PMCID: PMC2711383          DOI: 10.1016/j.bpj.2009.01.066

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  47 in total

1.  Femtosecond infrared spectroscopy of bacteriorhodopsin chromophore isomerization.

Authors:  Johannes Herbst; Karsten Heyne; Rolf Diller
Journal:  Science       Date:  2002-08-02       Impact factor: 47.728

2.  Ab initio quantum chemical investigation of the first steps of the photocycle of phototropin: a model study.

Authors:  Christian Neiss; Peter Saalfrank
Journal:  Photochem Photobiol       Date:  2003-01       Impact factor: 3.421

3.  Listening to the blue: the time-resolved thermodynamics of the bacterial blue-light receptor YtvA and its isolated LOV domain.

Authors:  Aba Losi; Benjamin Quest; Wolfgang Gärtner
Journal:  Photochem Photobiol Sci       Date:  2003-07       Impact factor: 3.982

4.  The photocycle of a flavin-binding domain of the blue light photoreceptor phototropin.

Authors:  T E Swartz; S B Corchnoy; J M Christie; J W Lewis; I Szundi; W R Briggs; R A Bogomolni
Journal:  J Biol Chem       Date:  2001-07-06       Impact factor: 5.157

5.  Disruption of the LOV-Jalpha helix interaction activates phototropin kinase activity.

Authors:  Shannon M Harper; John M Christie; Kevin H Gardner
Journal:  Biochemistry       Date:  2004-12-28       Impact factor: 3.162

6.  Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction.

Authors:  S Crosson; K Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

7.  On the basicity of the excited state of flavins.

Authors:  P S Song
Journal:  Photochem Photobiol       Date:  1968-03       Impact factor: 3.421

8.  Ultrafast vibrational spectroscopy of the flavin chromophore.

Authors:  Minako Kondo; Jérôme Nappa; Kate L Ronayne; Allison L Stelling; Peter J Tonge; Stephen R Meech
Journal:  J Phys Chem B       Date:  2006-10-19       Impact factor: 2.991

9.  Structural basis of a phototropin light switch.

Authors:  Shannon M Harper; Lori C Neil; Kevin H Gardner
Journal:  Science       Date:  2003-09-12       Impact factor: 47.728

10.  On the reaction mechanism of adduct formation in LOV domains of the plant blue-light receptor phototropin.

Authors:  Erik Schleicher; Radoslaw M Kowalczyk; Christopher W M Kay; Peter Hegemann; Adelbert Bacher; Markus Fischer; Robert Bittl; Gerald Richter; Stefan Weber
Journal:  J Am Chem Soc       Date:  2004-09-08       Impact factor: 15.419

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  28 in total

1.  Electronic and protein structural dynamics of a photosensory histidine kinase.

Authors:  Maxime T A Alexandre; Erin B Purcell; Rienk van Grondelle; Bruno Robert; John T M Kennis; Sean Crosson
Journal:  Biochemistry       Date:  2010-06-15       Impact factor: 3.162

2.  Blue light-induced dimerization of a bacterial LOV-HTH DNA-binding protein.

Authors:  Brian D Zoltowski; Laura B Motta-Mena; Kevin H Gardner
Journal:  Biochemistry       Date:  2013-09-12       Impact factor: 3.162

3.  Photosensitivity of kinase activation by blue light involves the lifetime of a cysteinyl-flavin adduct intermediate, S390, in the photoreaction cycle of the LOV2 domain in phototropin, a plant blue light receptor.

Authors:  Koji Okajima; Sachiko Kashojiya; Satoru Tokutomi
Journal:  J Biol Chem       Date:  2012-10-12       Impact factor: 5.157

4.  Femtosecond to Millisecond Dynamics of Light Induced Allostery in the Avena sativa LOV Domain.

Authors:  Agnieszka A Gil; Sergey P Laptenok; Jarrod B French; James N Iuliano; Andras Lukacs; Christopher R Hall; Igor V Sazanovich; Gregory M Greetham; Adelbert Bacher; Boris Illarionov; Markus Fischer; Peter J Tonge; Stephen R Meech
Journal:  J Phys Chem B       Date:  2017-01-25       Impact factor: 2.991

5.  Structure and Function of the ZTL/FKF1/LKP2 Group Proteins in Arabidopsis.

Authors:  Brian D Zoltowski; Takato Imaizumi
Journal:  Enzymes       Date:  2014

6.  Variation in LOV Photoreceptor Activation Dynamics Probed by Time-Resolved Infrared Spectroscopy.

Authors:  James N Iuliano; Agnieszka A Gil; Sergey P Laptenok; Christopher R Hall; Jinnette Tolentino Collado; Andras Lukacs; Safaa A Hag Ahmed; Jenna Abyad; Taraneh Daryaee; Gregory M Greetham; Igor V Sazanovich; Boris Illarionov; Adelbert Bacher; Markus Fischer; Michael Towrie; Jarrod B French; Stephen R Meech; Peter J Tonge
Journal:  Biochemistry       Date:  2018-01-04       Impact factor: 3.162

7.  The primary photophysics of the Avena sativa phototropin 1 LOV2 domain observed with time-resolved emission spectroscopy.

Authors:  Ivo H M van Stokkum; Magdalena Gauden; Sean Crosson; Rienk van Grondelle; Keith Moffat; John T M Kennis
Journal:  Photochem Photobiol       Date:  2011-02-22       Impact factor: 3.421

Review 8.  Blue-Light Receptors for Optogenetics.

Authors:  Aba Losi; Kevin H Gardner; Andreas Möglich
Journal:  Chem Rev       Date:  2018-07-09       Impact factor: 60.622

9.  Mechanism of signal transduction of the LOV2-Jα photosensor from Avena sativa.

Authors:  Emanuel Peter; Bernhard Dick; Stephan A Baeurle
Journal:  Nat Commun       Date:  2010-11-16       Impact factor: 14.919

10.  Modulating LOV domain photodynamics with a residue alteration outside the chromophore binding site.

Authors:  Sang-Hun Song; Peter L Freddolino; Abigail I Nash; Elizabeth C Carroll; Klaus Schulten; Kevin H Gardner; Delmar S Larsen
Journal:  Biochemistry       Date:  2011-03-01       Impact factor: 3.162

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