Literature DB >> 24289221

Femtosecond dynamics of short-range protein electron transfer in flavodoxin.

Ting-Fang He1, Lijun Guo, Xunmin Guo, Chih-Wei Chang, Lijuan Wang, Dongping Zhong.   

Abstract

Intraprotein electron transfer (ET) in flavoproteins is important for understanding the correlation of their redox, configuration, and reactivity at the active site. Here, we used oxidized flavodoxin as a model system and report our complete characterization of a photoinduced redox cycle from the initial charge separation in 135-340 fs to subsequent charge recombination in 0.95-1.6 ps and to the final cooling relaxation of the product(s) in 2.5-4.3 ps. With 11 mutations at the active site, we observed that these ultrafast ET dynamics, much faster than active-site relaxation, mainly depend on the reduction potentials of the electron donors with minor changes caused by mutations, reflecting a highly localized ET reaction between the stacked donor and acceptor at a van der Waals distance and leading to a gas-phase type of bimolecular ET reaction confined in the active-site nanospace. Significantly, these ultrafast ET reactions ensure our direct observation of vibrationally excited reaction product(s), suggesting that the back ET barrier is effectively reduced because of the decrease in the total free energy in the Marcus inverted region, leading to the accelerated charge recombination. Such vibrationally coupled charge recombination should be a general feature of flavoproteins with similar configurations and interactions between the cofactor flavin and neighboring aromatic residues.

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Year:  2013        PMID: 24289221      PMCID: PMC3909472          DOI: 10.1021/bi401137u

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  38 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-09       Impact factor: 11.205

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10.  Comparison between ultrafast fluorescence dynamics of FMN binding protein from Desulfovibrio vulgaris, strain Miyazaki, in solution vs crystal phases.

Authors:  Haik Chosrowjan; Seiji Taniguchi; Noboru Mataga; Fumio Tanaka; Daisuke Todoroki; Masaya Kitamura
Journal:  J Phys Chem B       Date:  2007-07-04       Impact factor: 2.991

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  13 in total

Review 1.  Dynamics and mechanisms of DNA repair by photolyase.

Authors:  Zheyun Liu; Lijuan Wang; Dongping Zhong
Journal:  Phys Chem Chem Phys       Date:  2015-05-14       Impact factor: 3.676

2.  Equilibrium and ultrafast kinetic studies manipulating electron transfer: A short-lived flavin semiquinone is not sufficient for electron bifurcation.

Authors:  John P Hoben; Carolyn E Lubner; Michael W Ratzloff; Gerrit J Schut; Diep M N Nguyen; Karl W Hempel; Michael W W Adams; Paul W King; Anne-Frances Miller
Journal:  J Biol Chem       Date:  2017-06-14       Impact factor: 5.157

3.  Spectroscopic evidence for direct flavin-flavin contact in a bifurcating electron transfer flavoprotein.

Authors:  H Diessel Duan; Nishya Mohamed-Raseek; Anne-Frances Miller
Journal:  J Biol Chem       Date:  2020-07-13       Impact factor: 5.157

4.  Nonequilibrium dynamics of photoinduced forward and backward electron transfer reactions.

Authors:  Yangyi Lu; Dongping Zhong
Journal:  J Chem Phys       Date:  2020-02-14       Impact factor: 3.488

5.  Photoinduced hole hopping through tryptophans in proteins.

Authors:  Stanislav Záliš; Jan Heyda; Filip Šebesta; Jay R Winkler; Harry B Gray; Antonín Vlček
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 11.205

Review 6.  Photolyase: Dynamics and Mechanisms of Repair of Sun-Induced DNA Damage.

Authors:  Meng Zhang; Lijuan Wang; Dongping Zhong
Journal:  Photochem Photobiol       Date:  2017-01-25       Impact factor: 3.421

7.  Understanding Short-Range Electron-Transfer Dynamics in Proteins.

Authors:  Yangyi Lu; Dongping Zhong
Journal:  J Phys Chem Lett       Date:  2019-01-10       Impact factor: 6.475

8.  Short-Range Electron Transfer in Reduced Flavodoxin: Ultrafast Nonequilibrium Dynamics Coupled with Protein Fluctuations.

Authors:  Mainak Kundu; Ting-Fang He; Yangyi Lu; Lijuan Wang; Dongping Zhong
Journal:  J Phys Chem Lett       Date:  2018-05-11       Impact factor: 6.475

9.  Circadian clock activity of cryptochrome relies on tryptophan-mediated photoreduction.

Authors:  Changfan Lin; Deniz Top; Craig C Manahan; Michael W Young; Brian R Crane
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-26       Impact factor: 11.205

10.  Peripheral Methionine Residues Impact Flavin Photoreduction and Protonation in an Engineered LOV Domain Light Sensor.

Authors:  Estella F Yee; Sabine Oldemeyer; Elena Böhm; Abir Ganguly; Darrin M York; Tilman Kottke; Brian R Crane
Journal:  Biochemistry       Date:  2021-03-31       Impact factor: 3.162

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