Literature DB >> 16800612

Ultrafast heme dynamics in ferrous versus ferric cytochrome c studied by time-resolved resonance Raman and transient absorption spectroscopy.

Michel Negrerie1, Simona Cianetti, Marten H Vos, Jean-Louis Martin, Sergei G Kruglik.   

Abstract

Cytochrome c (Cyt c) is a heme protein involved in electron transfer and also in apoptosis. Its heme iron is bisaxially ligated to histidine and methionine side chains and both ferric and ferrous redox states are physiologically relevant, as well as a ligand exchange between internal residue and external diatomic molecule. The photodissociation of internal axial ligand was observed for several ferrous heme proteins including Cyt c, but no time-resolved studies have been reported on ferric Cyt c. To investigate how the oxidation state of the heme influences the primary photoprocesses, we performed a comprehensive comparative study on horse heart Cyt c by subpicosecond time-resolved resonance Raman and femtosecond transient absorption spectroscopy. We found that in ferric Cyt c, in contrast to ferrous Cyt c, the photodissociation of an internal ligand does not take place, and relaxation dynamics is dominated by vibrational cooling in the ground electronic state of the heme. The intermolecular vibrational energy transfer was found to proceed in a single phase with a temperature decay of approximately 7 ps in both ferric and ferrous Cyt c. For ferrous Cyt c, the instantaneous photodissociation of the methionine side chain from the heme iron is the dominant event, and its rebinding proceeds in two phases, with time constants of approximately 5 and approximately 16 ps. A mechanism of this process is discussed, and the difference in photoinduced coordination behavior between ferric and ferrous Cyt c is explained by an involvement of the excited electronic state coupled with conformational relaxation of the heme.

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Year:  2006        PMID: 16800612     DOI: 10.1021/jp0559377

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  17 in total

1.  Picosecond primary structural transition of the heme is retarded after nitric oxide binding to heme proteins.

Authors:  Sergei G Kruglik; Byung-Kuk Yoo; Stefan Franzen; Marten H Vos; Jean-Louis Martin; Michel Negrerie
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-19       Impact factor: 11.205

2.  Motion of proximal histidine and structural allosteric transition in soluble guanylate cyclase.

Authors:  Byung-Kuk Yoo; Isabelle Lamarre; Jean-Louis Martin; Fabrice Rappaport; Michel Negrerie
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-23       Impact factor: 11.205

3.  Photo-induced oxidation of the uniquely liganded heme f in the cytochrome b6f complex of oxygenic photosynthesis.

Authors:  Adrien A P Chauvet; Rachna Agarwal; André Al Haddad; Frank van Mourik; William A Cramer
Journal:  Phys Chem Chem Phys       Date:  2016-04-25       Impact factor: 3.676

4.  Investigations of heme distortion, low-frequency vibrational excitations, and electron transfer in cytochrome c.

Authors:  Yuhan Sun; Abdelkrim Benabbas; Weiqiao Zeng; Jesse G Kleingardner; Kara L Bren; Paul M Champion
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-21       Impact factor: 11.205

5.  Ultrafast photochemistry of the bc1 complex.

Authors:  Marten H Vos; Brandon J Reeder; Fevzi Daldal; Ursula Liebl
Journal:  Phys Chem Chem Phys       Date:  2017-03-01       Impact factor: 3.676

6.  Vibrational coherence spectroscopy of the heme domain in the CO-sensing transcriptional activator CooA.

Authors:  Venugopal Karunakaran; Abdelkrim Benabbas; Hwan Youn; Paul M Champion
Journal:  J Am Chem Soc       Date:  2011-10-28       Impact factor: 15.419

7.  Quaternary structure controls ligand dynamics in soluble guanylate cyclase.

Authors:  Byung-Kuk Yoo; Isabelle Lamarre; Jean-Louis Martin; Michel Negrerie
Journal:  J Biol Chem       Date:  2012-01-04       Impact factor: 5.157

8.  Metalloprotein entatic control of ligand-metal bonds quantified by ultrafast x-ray spectroscopy.

Authors:  Michael W Mara; Ryan G Hadt; Marco Eli Reinhard; Thomas Kroll; Hyeongtaek Lim; Robert W Hartsock; Roberto Alonso-Mori; Matthieu Chollet; James M Glownia; Silke Nelson; Dimosthenis Sokaras; Kristjan Kunnus; Keith O Hodgson; Britt Hedman; Uwe Bergmann; Kelly J Gaffney; Edward I Solomon
Journal:  Science       Date:  2017-06-23       Impact factor: 47.728

9.  Investigations of the low-frequency spectral density of cytochrome c upon equilibrium unfolding.

Authors:  Yuhan Sun; Venugopal Karunakaran; Paul M Champion
Journal:  J Phys Chem B       Date:  2013-08-07       Impact factor: 2.991

10.  Subpicosecond oxygen trapping in the heme pocket of the oxygen sensor FixL observed by time-resolved resonance Raman spectroscopy.

Authors:  Sergei G Kruglik; Audrius Jasaitis; Klara Hola; Taku Yamashita; Ursula Liebl; Jean-Louis Martin; Marten H Vos
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-19       Impact factor: 11.205

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