Literature DB >> 16775303

Dicer-2 and R2D2 coordinately bind siRNA to promote assembly of the siRISC complexes.

Xiang Liu1, Feng Jiang, Savitha Kalidas, Dean Smith, Qinghua Liu.   

Abstract

In Drosophila melanogaster, the Dicer-2/R2D2 complex initiates RNA interference (RNAi) by processing long double-stranded RNA (dsRNA) into small interfering RNA (siRNA). Recent biochemical studies suggest that the Dcr-2/R2D2 complex also facilitates incorporation of siRNA into the RNA-induced silencing complex (siRISC). Here we present genetic evidence that R2D2 and Dcr-2 are both required for loading siRNA onto the siRISC complex. Consistent with this, only the Dcr-2/R2D2 complex, but neither Dcr-2 nor R2D2 alone, can efficiently interact with duplex siRNA. Furthermore, both dsRNA-binding domains of R2D2 are critical for binding to siRNA and promoting assembly of the siRISC complexes.

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Year:  2006        PMID: 16775303      PMCID: PMC1524895          DOI: 10.1261/rna.101606

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  16 in total

Review 1.  RNA interference.

Authors:  Gregory J Hannon
Journal:  Nature       Date:  2002-07-11       Impact factor: 49.962

Review 2.  Perspective: machines for RNAi.

Authors:  Yukihide Tomari; Phillip D Zamore
Journal:  Genes Dev       Date:  2005-03-01       Impact factor: 11.361

3.  A protein sensor for siRNA asymmetry.

Authors:  Yukihide Tomari; Christian Matranga; Benjamin Haley; Natalia Martinez; Phillip D Zamore
Journal:  Science       Date:  2004-11-19       Impact factor: 47.728

4.  Role for a bidentate ribonuclease in the initiation step of RNA interference.

Authors:  E Bernstein; A A Caudy; S M Hammond; G J Hannon
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

5.  Passenger-strand cleavage facilitates assembly of siRNA into Ago2-containing RNAi enzyme complexes.

Authors:  Christian Matranga; Yukihide Tomari; Chanseok Shin; David P Bartel; Phillip D Zamore
Journal:  Cell       Date:  2005-11-03       Impact factor: 41.582

6.  R2D2, a bridge between the initiation and effector steps of the Drosophila RNAi pathway.

Authors:  Qinghua Liu; Tim A Rand; Savitha Kalidas; Fenghe Du; Hyun-Eui Kim; Dean P Smith; Xiaodong Wang
Journal:  Science       Date:  2003-09-26       Impact factor: 47.728

7.  The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans.

Authors:  Hiroaki Tabara; Erbay Yigit; Haruhiko Siomi; Craig C Mello
Journal:  Cell       Date:  2002-06-28       Impact factor: 41.582

8.  A Dicer-2-dependent 80s complex cleaves targeted mRNAs during RNAi in Drosophila.

Authors:  John W Pham; Janice L Pellino; Young Sik Lee; Richard W Carthew; Erik J Sontheimer
Journal:  Cell       Date:  2004-04-02       Impact factor: 41.582

9.  Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways.

Authors:  Young Sik Lee; Kenji Nakahara; John W Pham; Kevin Kim; Zhengying He; Erik J Sontheimer; Richard W Carthew
Journal:  Cell       Date:  2004-04-02       Impact factor: 41.582

10.  Processing of pre-microRNAs by the Dicer-1-Loquacious complex in Drosophila cells.

Authors:  Kuniaki Saito; Akira Ishizuka; Haruhiko Siomi; Mikiko C Siomi
Journal:  PLoS Biol       Date:  2005-05-24       Impact factor: 8.029

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  75 in total

1.  Specific requirement of DRB4, a dsRNA-binding protein, for the in vitro dsRNA-cleaving activity of Arabidopsis Dicer-like 4.

Authors:  Akihito Fukudome; Akihiro Kanaya; Mai Egami; Yukihiro Nakazawa; Akihiro Hiraguri; Hiromitsu Moriyama; Toshiyuki Fukuhara
Journal:  RNA       Date:  2011-01-26       Impact factor: 4.942

Review 2.  How does RNA editing affect dsRNA-mediated gene silencing?

Authors:  B L Bass
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2006

3.  Strand-specific 5'-O-methylation of siRNA duplexes controls guide strand selection and targeting specificity.

Authors:  Po Yu Chen; Lasse Weinmann; Dimos Gaidatzis; Yi Pei; Mihaela Zavolan; Thomas Tuschl; Gunter Meister
Journal:  RNA       Date:  2007-12-19       Impact factor: 4.942

Review 4.  siRNA and miRNA processing: new functions for Cajal bodies.

Authors:  Olga Pontes; Craig S Pikaard
Journal:  Curr Opin Genet Dev       Date:  2008-03-11       Impact factor: 5.578

Review 5.  On the road to reading the RNA-interference code.

Authors:  Haruhiko Siomi; Mikiko C Siomi
Journal:  Nature       Date:  2009-01-22       Impact factor: 49.962

Review 6.  A three-dimensional view of the molecular machinery of RNA interference.

Authors:  Martin Jinek; Jennifer A Doudna
Journal:  Nature       Date:  2009-01-22       Impact factor: 49.962

7.  Requirement for CRIF1 in RNA interference and Dicer-2 stability.

Authors:  Su Jun Lim; Anthony Scott; Xiao-Peng Xiong; Shabnam Vahidpour; John Karijolich; Dongdong Guo; Shanshan Pei; Yi-Tao Yu; Rui Zhou; Willis X Li
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

8.  Broad RNA interference-mediated antiviral immunity and virus-specific inducible responses in Drosophila.

Authors:  Cordula Kemp; Stefanie Mueller; Akira Goto; Vincent Barbier; Simona Paro; François Bonnay; Catherine Dostert; Laurent Troxler; Charles Hetru; Carine Meignin; Sébastien Pfeffer; Jules A Hoffmann; Jean-Luc Imler
Journal:  J Immunol       Date:  2012-12-19       Impact factor: 5.422

9.  Functional analysis of dicer-2 missense mutations in the siRNA pathway of Drosophila.

Authors:  Do Hwan Lim; Jung Kim; Sanguk Kim; Richard W Carthew; Young Sik Lee
Journal:  Biochem Biophys Res Commun       Date:  2008-04-30       Impact factor: 3.575

Review 10.  Mechanisms underlying epigenetic regulation in Arabidopsis thaliana.

Authors:  Ashley L Jones; Sibum Sung
Journal:  Integr Comp Biol       Date:  2014-05-07       Impact factor: 3.326

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