Literature DB >> 19158786

A three-dimensional view of the molecular machinery of RNA interference.

Martin Jinek1, Jennifer A Doudna.   

Abstract

In eukaryotes, small non-coding RNAs regulate gene expression, helping to control cellular metabolism, growth and differentiation, to maintain genome integrity, and to combat viruses and mobile genetic elements. These pathways involve two specialized ribonucleases that control the production and function of small regulatory RNAs. The enzyme Dicer cleaves double-stranded RNA precursors, generating short interfering RNAs and microRNAs in the cytoplasm. These small RNAs are transferred to Argonaute proteins, which guide the sequence-specific silencing of messenger RNAs that contain complementary sequences by either enzymatically cleaving the mRNA or repressing its translation. The molecular structures of Dicer and the Argonaute proteins, free and bound to small RNAs, have offered exciting insights into the molecular mechanisms that are central to RNA silencing pathways.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19158786     DOI: 10.1038/nature07755

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  92 in total

1.  Crystal structures of RNase H bound to an RNA/DNA hybrid: substrate specificity and metal-dependent catalysis.

Authors:  Marcin Nowotny; Sergei A Gaidamakov; Robert J Crouch; Wei Yang
Journal:  Cell       Date:  2005-07-01       Impact factor: 41.582

Review 2.  How do microRNAs regulate gene expression?

Authors:  Richard J Jackson; Nancy Standart
Journal:  Sci STKE       Date:  2007-01-02

3.  Mouse Piwi-interacting RNAs are 2'-O-methylated at their 3' termini.

Authors:  Yohei Kirino; Zissimos Mourelatos
Journal:  Nat Struct Mol Biol       Date:  2007-03-25       Impact factor: 15.369

4.  Structural and biochemical insights into the dicing mechanism of mouse Dicer: a conserved lysine is critical for dsRNA cleavage.

Authors:  Zhihua Du; John K Lee; Richard Tjhen; Robert M Stroud; Thomas L James
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-11       Impact factor: 11.205

5.  Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage.

Authors:  Yu-Ren Yuan; Yi Pei; Jin-Biao Ma; Vitaly Kuryavyi; Maria Zhadina; Gunter Meister; Hong-Ying Chen; Zbigniew Dauter; Thomas Tuschl; Dinshaw J Patel
Journal:  Mol Cell       Date:  2005-08-05       Impact factor: 17.970

6.  Structural basis for double-stranded RNA processing by Dicer.

Authors:  Ian J Macrae; Kaihong Zhou; Fei Li; Adrian Repic; Angela N Brooks; W Zacheus Cande; Paul D Adams; Jennifer A Doudna
Journal:  Science       Date:  2006-01-13       Impact factor: 47.728

7.  Argonaute2 cleaves the anti-guide strand of siRNA during RISC activation.

Authors:  Tim A Rand; Sean Petersen; Fenghe Du; Xiaodong Wang
Journal:  Cell       Date:  2005-11-03       Impact factor: 41.582

8.  Dicer-2 and R2D2 coordinately bind siRNA to promote assembly of the siRISC complexes.

Authors:  Xiang Liu; Feng Jiang; Savitha Kalidas; Dean Smith; Qinghua Liu
Journal:  RNA       Date:  2006-06-14       Impact factor: 4.942

9.  Crystal structure of human DGCR8 core.

Authors:  Sun Young Sohn; Won Jin Bae; Jeong Joo Kim; Kyu-Hyeon Yeom; V Narry Kim; Yunje Cho
Journal:  Nat Struct Mol Biol       Date:  2007-08-19       Impact factor: 15.369

10.  Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila.

Authors:  Julius Brennecke; Alexei A Aravin; Alexander Stark; Monica Dus; Manolis Kellis; Ravi Sachidanandam; Gregory J Hannon
Journal:  Cell       Date:  2007-03-08       Impact factor: 41.582

View more
  275 in total

1.  Duplex end breathing determines serum stability and intracellular potency of siRNA-Au NPs.

Authors:  Pinal C Patel; Liangliang Hao; Weng Si Au Yeung; Chad A Mirkin
Journal:  Mol Pharm       Date:  2011-06-28       Impact factor: 4.939

Review 2.  Androgens and skeletal muscle: cellular and molecular action mechanisms underlying the anabolic actions.

Authors:  Vanessa Dubois; Michaël Laurent; Steven Boonen; Dirk Vanderschueren; Frank Claessens
Journal:  Cell Mol Life Sci       Date:  2011-11-19       Impact factor: 9.261

Review 3.  MicroRNA control of bone formation and homeostasis.

Authors:  Jane B Lian; Gary S Stein; Andre J van Wijnen; Janet L Stein; Mohammad Q Hassan; Tripti Gaur; Ying Zhang
Journal:  Nat Rev Endocrinol       Date:  2012-01-31       Impact factor: 43.330

4.  Integration of MicroRNA databases to study MicroRNAs associated with multiple sclerosis.

Authors:  Charlotte Angerstein; Michael Hecker; Brigitte Katrin Paap; Dirk Koczan; Madhan Thamilarasan; Hans-Jürgen Thiesen; Uwe Klaus Zettl
Journal:  Mol Neurobiol       Date:  2012-05-02       Impact factor: 5.590

5.  MicroRNA-301a regulation of a T-helper 17 immune response controls autoimmune demyelination.

Authors:  Marcin P Mycko; Maria Cichalewska; Agnieszka Machlanska; Hanna Cwiklinska; Magdalena Mariasiewicz; Krzysztof W Selmaj
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-18       Impact factor: 11.205

6.  Transcription control by long non-coding RNAs.

Authors:  Tyler Faust; Alan Frankel; Iván D'Orso
Journal:  Transcription       Date:  2012-03-01

Review 7.  Novel endoribonucleases as central players in various pathways of eukaryotic RNA metabolism.

Authors:  Rafal Tomecki; Andrzej Dziembowski
Journal:  RNA       Date:  2010-07-30       Impact factor: 4.942

8.  Identification, chromosomal mapping and conserved synteny of porcine Argonaute family of genes.

Authors:  Xiang Zhou; Heng Guo; Ke Chen; Hanhua Cheng; Rongjia Zhou
Journal:  Genetica       Date:  2010-05-09       Impact factor: 1.082

9.  Enhanced gene silencing in cells cured of persistent virus infection by RNA interference.

Authors:  Isabelle Pelletier; Aure Saulnier; Cynthia Brisac; Sophie Jegouic; Nicolas Vabret; Frédéric Tangy; Bruno Blondel; Florence Colbère-Garapin
Journal:  J Virol       Date:  2010-04-14       Impact factor: 5.103

10.  Antisense tools for functional studies of human Argonaute proteins.

Authors:  Alessandra Mescalchin; Anke Detzer; Ulrike Weirauch; Maximilian J Hahnel; Christina Engel; Georg Sczakiel
Journal:  RNA       Date:  2010-10-08       Impact factor: 4.942

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.