Literature DB >> 16731615

tRNAHis guanylyltransferase catalyzes a 3'-5' polymerization reaction that is distinct from G-1 addition.

Jane E Jackman1, Eric M Phizicky.   

Abstract

Yeast tRNA(His) guanylyltransferase, Thg1, is an essential protein that adds a single guanine to the 5' end (G(-1)) of tRNA(His). This G(-1) residue is required for aminoacylation of tRNA(His) by histidyl-tRNA synthetase, both in vitro and in vivo. The guanine nucleotide addition reaction catalyzed by Thg1 extends the polynucleotide chain in the reverse (3'-5') direction of other known polymerases, albeit by one nucleotide. Here, we show that alteration of the 3' end of the Thg1 substrate tRNA(His) unleashes an unexpected reverse polymerase activity of wild-type Thg1, resulting in the 3'-5' addition of multiple nucleotides to the tRNA, with efficiency comparable to the G(-1) addition reaction. The addition of G(-1) forms a mismatched G.A base pair at the 5' end of tRNA(His), and, with monophosphorylated tRNA substrates, it is absolutely specific for tRNA(His). By contrast, reverse polymerization forms multiple G.C or C.G base pairs, and, with preactivated tRNA species, it can initiate at positions other than -1 and is not specific for tRNA(His). Thus, wild-type Thg1 catalyzes a templated polymerization reaction acting in the reverse direction of that of canonical DNA and RNA polymerases. Surprisingly, Thg1 can also readily use dNTPs for nucleotide addition. These results suggest that 3'-5' polymerization represents either an uncharacterized role for Thg1 in RNA or DNA repair or metabolism, or it may be a remnant of an earlier catalytic strategy used in nature.

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Year:  2006        PMID: 16731615      PMCID: PMC1482633          DOI: 10.1073/pnas.0603068103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

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Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

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Journal:  J Biol Chem       Date:  1991-12-05       Impact factor: 5.157

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Journal:  EMBO J       Date:  1998-06-01       Impact factor: 11.598

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Journal:  Nucleic Acids Res       Date:  1993-09-11       Impact factor: 16.971

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Journal:  Nucleic Acids Res       Date:  1994-11-25       Impact factor: 16.971

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  37 in total

1.  Kinetic analysis of 3'-5' nucleotide addition catalyzed by eukaryotic tRNA(His) guanylyltransferase.

Authors:  Brian A Smith; Jane E Jackman
Journal:  Biochemistry       Date:  2011-12-14       Impact factor: 3.162

2.  RNA ligase RtcB splices 3'-phosphate and 5'-OH ends via covalent RtcB-(histidinyl)-GMP and polynucleotide-(3')pp(5')G intermediates.

Authors:  Anupam K Chakravarty; Roman Subbotin; Brian T Chait; Stewart Shuman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

Review 3.  Doing it in reverse: 3'-to-5' polymerization by the Thg1 superfamily.

Authors:  Jane E Jackman; Jonatha M Gott; Michael W Gray
Journal:  RNA       Date:  2012-03-28       Impact factor: 4.942

Review 4.  tRNA biology charges to the front.

Authors:  Eric M Phizicky; Anita K Hopper
Journal:  Genes Dev       Date:  2010-09-01       Impact factor: 11.361

5.  Crystal structure of a reverse polymerase.

Authors:  John J Perona; Javin P Oza
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-15       Impact factor: 11.205

6.  Structural basis of reverse nucleotide polymerization.

Authors:  Akiyoshi Nakamura; Taiki Nemoto; Ilka U Heinemann; Keitaro Yamashita; Tomoyo Sonoda; Keisuke Komoda; Isao Tanaka; Dieter Söll; Min Yao
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-09       Impact factor: 11.205

7.  tRNA(His) guanylyltransferase (THG1), a unique 3'-5' nucleotidyl transferase, shares unexpected structural homology with canonical 5'-3' DNA polymerases.

Authors:  Samantha J Hyde; Brian E Eckenroth; Brian A Smith; William A Eberley; Nicholas H Heintz; Jane E Jackman; Sylvie Doublié
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-08       Impact factor: 11.205

8.  Repairing tRNA termini: News from the 3' end.

Authors:  Christiane Rammelt; Walter Rossmanith
Journal:  RNA Biol       Date:  2016-09-23       Impact factor: 4.652

9.  Template-dependent 3'-5' nucleotide addition is a shared feature of tRNAHis guanylyltransferase enzymes from multiple domains of life.

Authors:  Maria G Abad; Bhalchandra S Rao; Jane E Jackman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-18       Impact factor: 11.205

10.  Presence of a classical RRM-fold palm domain in Thg1-type 3'- 5'nucleic acid polymerases and the origin of the GGDEF and CRISPR polymerase domains.

Authors:  Vivek Anantharaman; Lakshminarayan M Iyer; L Aravind
Journal:  Biol Direct       Date:  2010-06-30       Impact factor: 4.540

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