Literature DB >> 16712399

Genetic toggle switch without cooperative binding.

Azi Lipshtat1, Adiel Loinger, Nathalie Q Balaban, Ofer Biham.   

Abstract

Genetic switch systems with mutual repression of two transcription factors are studied using deterministic and stochastic methods. Numerous studies have concluded that cooperative binding is a necessary condition for the emergence of bistability in these systems. Here we show that, for a range of biologically relevant conditions, a suitable combination of network structure and stochastic effects gives rise to bistability even without cooperative binding.

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Year:  2006        PMID: 16712399     DOI: 10.1103/PhysRevLett.96.188101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  53 in total

1.  Stability and multiattractor dynamics of a toggle switch based on a two-stage model of stochastic gene expression.

Authors:  Michael Strasser; Fabian J Theis; Carsten Marr
Journal:  Biophys J       Date:  2012-01-03       Impact factor: 4.033

2.  Bimodal gene expression in noncooperative regulatory systems.

Authors:  Anna Ochab-Marcinek; Marcin Tabaka
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-06       Impact factor: 11.205

3.  Defining cooperativity in gene regulation locally through intrinsic noise.

Authors:  M Maienschein-Cline; A Warmflash; A R Dinner
Journal:  IET Syst Biol       Date:  2010-11       Impact factor: 1.615

4.  DNA-Binding Kinetics Determines the Mechanism of Noise-Induced Switching in Gene Networks.

Authors:  Margaret J Tse; Brian K Chu; Mahua Roy; Elizabeth L Read
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

5.  Bifurcation dynamics and determination of alternate cell fates in bipotent progenitor cells.

Authors:  Shanshan Li; Yanwei Liu; Zengrong Liu; Ruiqi Wang
Journal:  Cogn Neurodyn       Date:  2015-01-21       Impact factor: 5.082

6.  Maximum Caliber Can Build and Infer Models of Oscillation in a Three-Gene Feedback Network.

Authors:  Taylor Firman; Anar Amgalan; Kingshuk Ghosh
Journal:  J Phys Chem B       Date:  2019-01-09       Impact factor: 2.991

7.  Reaction coordinates for the flipping of genetic switches.

Authors:  Marco J Morelli; Sorin Tanase-Nicola; Rosalind J Allen; Pieter Rein ten Wolde
Journal:  Biophys J       Date:  2008-01-25       Impact factor: 4.033

8.  Extinction and resurrection in gene networks.

Authors:  Daniel Schultz; Aleksandra M Walczak; José N Onuchic; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-25       Impact factor: 11.205

9.  Lambda-prophage induction modeled as a cooperative failure mode of lytic repression.

Authors:  Nicholas Chia; Ido Golding; Nigel Goldenfeld
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-09-01

10.  Type of noise defines global attractors in bistable molecular regulatory systems.

Authors:  Joanna Jaruszewicz; Pawel J Zuk; Tomasz Lipniacki
Journal:  J Theor Biol       Date:  2012-10-11       Impact factor: 2.691

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