Literature DB >> 16683791

A high-resolution solid-state NMR approach for the structural studies of bicelles.

Sergey Dvinskikh1, Ulrich Dürr, Kazutoshi Yamamoto, Ayyalusamy Ramamoorthy.   

Abstract

Bicelles are increasingly being used as membrane mimicking systems in NMR experiments to investigate the structure of membrane proteins. In this study, we demonstrate the effectiveness of a 2D solid-state NMR approach that can be used to measure the structural constraints, such as heteronuclear dipolar couplings between 1H, 13C, and 31P nuclei, in bicelles without the need for isotopic enrichment. This method does not require a high radio frequency power unlike the presently used rotating-frame separated-local-field (SLF) techniques, such as PISEMA. In addition, multiple dipolar couplings can be measured accurately, and the presence of a strong dipolar coupling does not suppress the weak couplings. High-resolution spectra obtained from magnetically aligned DMPC:DHPC bicelles even in the presence of peptides suggest that this approach will be useful in understanding lipid-protein interactions that play a vital role in shaping up the function of membrane proteins.

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Year:  2006        PMID: 16683791      PMCID: PMC2529225          DOI: 10.1021/ja061153a

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  6 in total

1.  A "magic sandwich" pulse sequence with reduced offset dependence for high-resolution separated local field spectroscopy.

Authors:  Alexander A Nevzorov; Stanley J Opella
Journal:  J Magn Reson       Date:  2003-09       Impact factor: 2.229

Review 2.  Structure determination of membrane proteins by NMR spectroscopy.

Authors:  Stanley J Opella; Francesca M Marassi
Journal:  Chem Rev       Date:  2004-08       Impact factor: 60.622

3.  Frequency offset refocused PISEMA-type sequences.

Authors:  Sergey V Dvinskikh; Dick Sandström
Journal:  J Magn Reson       Date:  2005-04-22       Impact factor: 2.229

4.  Bicelles: a model membrane system for all seasons?

Authors:  C R Sanders; R S Prosser
Journal:  Structure       Date:  1998-10-15       Impact factor: 5.006

5.  Membrane thinning due to antimicrobial peptide binding: an atomic force microscopy study of MSI-78 in lipid bilayers.

Authors:  Almut Mecke; Dong-Kuk Lee; Ayyalusamy Ramamoorthy; Bradford G Orr; Mark M Banaszak Holl
Journal:  Biophys J       Date:  2005-09-23       Impact factor: 4.033

6.  Probing membrane topology by high-resolution 1H-13C heteronuclear dipolar solid-state NMR spectroscopy.

Authors:  Jun-Xia Lu; Krishnan Damodaran; Gary A Lorigan
Journal:  J Magn Reson       Date:  2005-11-07       Impact factor: 2.229

  6 in total
  20 in total

1.  Proton-evolved local-field solid-state NMR studies of cytochrome b5 embedded in bicelles, revealing both structural and dynamical information.

Authors:  Ronald Soong; Pieter E S Smith; Jiadi Xu; Kazutoshi Yamamoto; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

2.  Sensitivity and resolution enhancement in solid-state NMR spectroscopy of bicelles.

Authors:  Sergey V Dvinskikh; Kazutoshi Yamamoto; Ulrich H N Dürr; Ayyalusamy Ramamoorthy
Journal:  J Magn Reson       Date:  2006-11-02       Impact factor: 2.229

3.  Bicelle-enabled structural studies on a membrane-associated cytochrome B5 by solid-state MAS NMR spectroscopy.

Authors:  Jiadi Xu; Ulrich H N Dürr; Sang-Choul Im; Zhehong Gan; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

4.  Multiscale simulation of microbe structure and dynamics.

Authors:  Harshad Joshi; Abhishek Singharoy; Yuriy V Sereda; Srinath C Cheluvaraja; Peter J Ortoleva
Journal:  Prog Biophys Mol Biol       Date:  2011-07-23       Impact factor: 3.667

5.  Human cannabinoid 1 GPCR C-terminal domain interacts with bilayer phospholipids to modulate the structure of its membrane environment.

Authors:  Elvis K Tiburu; Sergiy Tyukhtenko; Han Zhou; David R Janero; Jochem Struppe; Alexandros Makriyannis
Journal:  AAPS J       Date:  2011-01-14       Impact factor: 4.009

6.  Membrane disordering is not sufficient for membrane permeabilization by islet amyloid polypeptide: studies of IAPP(20-29) fragments.

Authors:  Jeffrey R Brender; Deborah L Heyl; Shyamprasad Samisetti; Samuel A Kotler; Joshua M Osborne; Ranadheer R Pesaru; Ayyalusamy Ramamoorthy
Journal:  Phys Chem Chem Phys       Date:  2013-03-15       Impact factor: 3.676

7.  Induction of negative curvature as a mechanism of cell toxicity by amyloidogenic peptides: the case of islet amyloid polypeptide.

Authors:  Pieter E S Smith; Jeffrey R Brender; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2009-04-01       Impact factor: 15.419

8.  Solid-state NMR reveals structural and dynamical properties of a membrane-anchored electron-carrier protein, cytochrome b5.

Authors:  Ulrich H N Dürr; Kazutoshi Yamamoto; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2007-05-09       Impact factor: 15.419

Review 9.  Beyond NMR spectra of antimicrobial peptides: dynamical images at atomic resolution and functional insights.

Authors:  Ayyalusamy Ramamoorthy
Journal:  Solid State Nucl Magn Reson       Date:  2009-03-31       Impact factor: 2.293

Review 10.  Spatial reorientation experiments for NMR of solids and partially oriented liquids.

Authors:  Rachel W Martin; John E Kelly; Kelsey A Collier
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2015-10-23       Impact factor: 9.795

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