Literature DB >> 19386477

Beyond NMR spectra of antimicrobial peptides: dynamical images at atomic resolution and functional insights.

Ayyalusamy Ramamoorthy1.   

Abstract

There is a considerable current interest in understanding the function of antimicrobial peptides for the development of potent novel antibiotic compounds with a very high selectivity. Since their interaction with the cell membrane is the major driving force for their function, solid-state NMR spectroscopy is the unique method of choice to study these insoluble, non-crystalline, membrane-peptide complexes. Here I discuss solid-state NMR studies of antimicrobial peptides that have reported high-resolution structure, dynamics, orientation, and oligomeric states of antimicrobial peptides in a membrane environment, and also address important questions about the mechanism of action at atomic-level resolution. Increasing number of solid-state NMR applications to antimicrobial peptides are expected in the near future, as these compounds are promising candidates to overcome ever-increasing antibiotic resistance problem and are well suited for the development and applications of solid-state NMR techniques.

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Year:  2009        PMID: 19386477      PMCID: PMC2694728          DOI: 10.1016/j.ssnmr.2009.03.003

Source DB:  PubMed          Journal:  Solid State Nucl Magn Reson        ISSN: 0926-2040            Impact factor:   2.293


  52 in total

1.  Using fluorous amino acids to modulate the biological activity of an antimicrobial peptide.

Authors:  Lindsey M Gottler; Hyang-Yeol Lee; Charles E Shelburne; Ayyalusamy Ramamoorthy; E Neil G Marsh
Journal:  Chembiochem       Date:  2008-02-15       Impact factor: 3.164

Review 2.  Studies on anticancer activities of antimicrobial peptides.

Authors:  David W Hoskin; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta       Date:  2007-11-22

3.  Using fluorous amino acids to probe the effects of changing hydrophobicity on the physical and biological properties of the beta-hairpin antimicrobial peptide protegrin-1.

Authors:  Lindsey M Gottler; Roberto de la Salud Bea; Charles E Shelburne; Ayyalusamy Ramamoorthy; E Neil G Marsh
Journal:  Biochemistry       Date:  2008-08-12       Impact factor: 3.162

4.  Zwitterionic phospholipids and sterols modulate antimicrobial peptide-induced membrane destabilization.

Authors:  A James Mason; Arnaud Marquette; Burkhard Bechinger
Journal:  Biophys J       Date:  2007-08-31       Impact factor: 4.033

5.  Structural determinants of antimicrobial and antiplasmodial activity and selectivity in histidine-rich amphipathic cationic peptides.

Authors:  A James Mason; Wardi Moussaoui; Tamer Abdelrahman; Alyae Boukhari; Philippe Bertani; Arnaud Marquette; Peiman Shooshtarizaheh; Gilles Moulay; Nelly Boehm; Bernard Guerold; Ruairidh J H Sawers; Antoine Kichler; Marie-Hélène Metz-Boutigue; Ermanno Candolfi; Gilles Prévost; Burkhard Bechinger
Journal:  J Biol Chem       Date:  2008-11-04       Impact factor: 5.157

6.  Pore structure, thinning effect, and lateral diffusive dynamics of oriented lipid membranes interacting with antimicrobial peptide protegrin-1: 31P and 2H solid-state NMR study.

Authors:  Sungsool Wi; Chul Kim
Journal:  J Phys Chem B       Date:  2008-08-14       Impact factor: 2.991

7.  Amyloid fiber formation and membrane disruption are separate processes localized in two distinct regions of IAPP, the type-2-diabetes-related peptide.

Authors:  Jeffrey R Brender; Edgar L Lee; Marchello A Cavitt; Ari Gafni; Duncan G Steel; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2008-04-30       Impact factor: 15.419

8.  NMR structure of the cathelicidin-derived human antimicrobial peptide LL-37 in dodecylphosphocholine micelles.

Authors:  Fernando Porcelli; Raffaello Verardi; Lei Shi; Katherine A Henzler-Wildman; Ayyalusamy Ramamoorthy; Gianluigi Veglia
Journal:  Biochemistry       Date:  2008-04-26       Impact factor: 3.162

Review 9.  The cytochromes P450 and b5 and their reductases--promising targets for structural studies by advanced solid-state NMR spectroscopy.

Authors:  Ulrich H N Dürr; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta       Date:  2007-08-24

10.  Molecular structural basis for polymorphism in Alzheimer's beta-amyloid fibrils.

Authors:  Anant K Paravastu; Richard D Leapman; Wai-Ming Yau; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-17       Impact factor: 11.205

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  54 in total

1.  Knowledge-based computational methods for identifying or designing novel, non-homologous antimicrobial peptides.

Authors:  Davor Juretić; Damir Vukičević; Dražen Petrov; Mario Novković; Viktor Bojović; Bono Lučić; Nada Ilić; Alessandro Tossi
Journal:  Eur Biophys J       Date:  2011-01-28       Impact factor: 1.733

Review 2.  Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.

Authors:  Hazime Saitô; Isao Ando; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05-07       Impact factor: 9.795

3.  Antimicrobial and membrane disrupting activities of a peptide derived from the human cathelicidin antimicrobial peptide LL37.

Authors:  Sathiah Thennarasu; Anmin Tan; Rajesh Penumatchu; Charles E Shelburne; Deborah L Heyl; Ayyalusamy Ramamoorthy
Journal:  Biophys J       Date:  2010-01-20       Impact factor: 4.033

4.  Role of cationic group structure in membrane binding and disruption by amphiphilic copolymers.

Authors:  Edmund F Palermo; Dong-Kuk Lee; Ayyalusamy Ramamoorthy; Kenichi Kuroda
Journal:  J Phys Chem B       Date:  2010-12-21       Impact factor: 2.991

5.  High-resolution paramagnetically enhanced solid-state NMR spectroscopy of membrane proteins at fast magic angle spinning.

Authors:  Meaghan E Ward; Shenlin Wang; Sridevi Krishnamurthy; Howard Hutchins; Michael Fey; Leonid S Brown; Vladimir Ladizhansky
Journal:  J Biomol NMR       Date:  2013-12-13       Impact factor: 2.835

6.  Additive and synergistic membrane permeabilization by antimicrobial (lipo)peptides and detergents.

Authors:  Hiren Patel; Quang Huynh; Dominik Bärlehner; Heiko Heerklotz
Journal:  Biophys J       Date:  2014-05-20       Impact factor: 4.033

Review 7.  Impact of membrane curvature on amyloid aggregation.

Authors:  Mayu S Terakawa; Yuxi Lin; Misaki Kinoshita; Shingo Kanemura; Dai Itoh; Toshihiko Sugiki; Masaki Okumura; Ayyalusamy Ramamoorthy; Young-Ho Lee
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-04-28       Impact factor: 3.747

Review 8.  Antimicrobial peptide resistance in Neisseria meningitidis.

Authors:  Yih-Ling Tzeng; David S Stephens
Journal:  Biochim Biophys Acta       Date:  2015-05-19

9.  NMR structure of pardaxin, a pore-forming antimicrobial peptide, in lipopolysaccharide micelles: mechanism of outer membrane permeabilization.

Authors:  Anirban Bhunia; Prerna N Domadia; Jaume Torres; Kevin J Hallock; Ayyalusamy Ramamoorthy; Surajit Bhattacharjya
Journal:  J Biol Chem       Date:  2009-12-03       Impact factor: 5.157

10.  Determining the mode of action involved in the antimicrobial activity of synthetic peptides: a solid-state NMR and FTIR study.

Authors:  Aurélien Lorin; Mathieu Noël; Marie-Ève Provencher; Vanessa Turcotte; Sébastien Cardinal; Patrick Lagüe; Normand Voyer; Michèle Auger
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

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