Literature DB >> 16625026

tRNAHis guanylyltransferase adds G-1 to the 5' end of tRNAHis by recognition of the anticodon, one of several features unexpectedly shared with tRNA synthetases.

Jane E Jackman1, Eric M Phizicky.   

Abstract

All eukaryotic tRNA(His) molecules are unique among tRNA species because they require addition of a guanine nucleotide at the -1 position by tRNA(His) guanylyltransferase, encoded in yeast by THG1. This G(-1) residue is both necessary and sufficient for aminoacylation of tRNA by histidyl-tRNA synthetase in vitro and is required for aminoacylation in vivo. Although Thg1 is presumed to be highly specific for tRNA(His) to prevent misacylation of tRNAs, the source of this specificity is unknown. We show here that Thg1 is >10,000-fold more selective for its cognate substrate tRNA(His) than for the noncognate substrate tRNA(Phe). We also demonstrate that the GUG anticodon of tRNA(His) is a crucial Thg1 identity element, since alteration of this anticodon in tRNA(His) completely abrogates Thg1 activity, and the simple introduction of this GUG anticodon to any of three noncognate tRNAs results in significant Thg1 activity. For tRNA(Phe), k(cat)/K(M) is improved by at least 200-fold. Thg1 is the only protein other than aminoacyl-tRNA synthetases that is known to use the anticodon as an identity element to discriminate among tRNA species while acting at a remote site on the tRNA, an unexpected link given the lack of any identifiable sequence similarity between these two families of proteins. Moreover, Thg1 and tRNA synthetases share two other features: They act in close proximity to one another at the top of the tRNA aminoacyl-acceptor stem, and the chemistry of their respective reactions is strikingly similar.

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Year:  2006        PMID: 16625026      PMCID: PMC1464847          DOI: 10.1261/rna.54706

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  28 in total

1.  Enzymatic aminoacylation of an eight-base-pair microhelix with histidine.

Authors:  C Francklyn; P Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

2.  Single amino acid changes in AspRS reveal alternative routes for expanding its tRNA repertoire in vivo.

Authors:  Franck Martin; Sharief Barends; Gilbert Eriani
Journal:  Nucleic Acids Res       Date:  2004-08-02       Impact factor: 16.971

3.  A truncated aminoacyl-tRNA synthetase modifies RNA.

Authors:  Juan C Salazar; Alexandre Ambrogelly; Pamela F Crain; James A McCloskey; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-19       Impact factor: 11.205

4.  Characterization of RPR1, an essential gene encoding the RNA component of Saccharomyces cerevisiae nuclear RNase P.

Authors:  J Y Lee; C E Rohlman; L A Molony; D R Engelke
Journal:  Mol Cell Biol       Date:  1991-02       Impact factor: 4.272

5.  Histidine tRNA guanylyltransferase from Saccharomyces cerevisiae. II. Catalytic mechanism.

Authors:  D Jahn; S Pande
Journal:  J Biol Chem       Date:  1991-12-05       Impact factor: 5.157

6.  Editing of transfer RNAs in Acanthamoeba castellanii mitochondria.

Authors:  K M Lonergan; M W Gray
Journal:  Science       Date:  1993-02-05       Impact factor: 47.728

7.  Predicted editing of additional transfer RNAs in Acanthamoeba castellanii mitochondria.

Authors:  K M Lonergan; M W Gray
Journal:  Nucleic Acids Res       Date:  1993-09-11       Impact factor: 16.971

8.  Histidylation by yeast HisRS of tRNA or tRNA-like structure relies on residues -1 and 73 but is dependent on the RNA context.

Authors:  J Rudinger; C Florentz; R Giegé
Journal:  Nucleic Acids Res       Date:  1994-11-25       Impact factor: 16.971

9.  Identity elements of Saccharomyces cerevisiae tRNA(His).

Authors:  N Nameki; H Asahara; M Shimizu; N Okada; H Himeno
Journal:  Nucleic Acids Res       Date:  1995-02-11       Impact factor: 16.971

10.  Phenylalanine and tyrosine transfer RNAs encoded by Tetrahymena pyriformis mitochondrial DNA: primary sequence, post-transcriptional modifications, and gene localization.

Authors:  M N Schnare; T Y Heinonen; P G Young; M W Gray
Journal:  Curr Genet       Date:  1985       Impact factor: 3.886

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  40 in total

1.  Kinetic analysis of 3'-5' nucleotide addition catalyzed by eukaryotic tRNA(His) guanylyltransferase.

Authors:  Brian A Smith; Jane E Jackman
Journal:  Biochemistry       Date:  2011-12-14       Impact factor: 3.162

Review 2.  tRNA biology charges to the front.

Authors:  Eric M Phizicky; Anita K Hopper
Journal:  Genes Dev       Date:  2010-09-01       Impact factor: 11.361

3.  Crystal structure of a reverse polymerase.

Authors:  John J Perona; Javin P Oza
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-15       Impact factor: 11.205

4.  tRNAHis guanylyltransferase catalyzes a 3'-5' polymerization reaction that is distinct from G-1 addition.

Authors:  Jane E Jackman; Eric M Phizicky
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-26       Impact factor: 11.205

5.  Structural basis of reverse nucleotide polymerization.

Authors:  Akiyoshi Nakamura; Taiki Nemoto; Ilka U Heinemann; Keitaro Yamashita; Tomoyo Sonoda; Keisuke Komoda; Isao Tanaka; Dieter Söll; Min Yao
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-09       Impact factor: 11.205

6.  tRNA(His) guanylyltransferase (THG1), a unique 3'-5' nucleotidyl transferase, shares unexpected structural homology with canonical 5'-3' DNA polymerases.

Authors:  Samantha J Hyde; Brian E Eckenroth; Brian A Smith; William A Eberley; Nicholas H Heintz; Jane E Jackman; Sylvie Doublié
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-08       Impact factor: 11.205

7.  Template-dependent 3'-5' nucleotide addition is a shared feature of tRNAHis guanylyltransferase enzymes from multiple domains of life.

Authors:  Maria G Abad; Bhalchandra S Rao; Jane E Jackman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-18       Impact factor: 11.205

8.  Plant mitochondria use two pathways for the biogenesis of tRNAHis.

Authors:  Antonio Placido; François Sieber; Anthony Gobert; Raffaele Gallerani; Philippe Giegé; Laurence Maréchal-Drouard
Journal:  Nucleic Acids Res       Date:  2010-07-25       Impact factor: 16.971

9.  Presence of a classical RRM-fold palm domain in Thg1-type 3'- 5'nucleic acid polymerases and the origin of the GGDEF and CRISPR polymerase domains.

Authors:  Vivek Anantharaman; Lakshminarayan M Iyer; L Aravind
Journal:  Biol Direct       Date:  2010-06-30       Impact factor: 4.540

Review 10.  Do all modifications benefit all tRNAs?

Authors:  Eric M Phizicky; Juan D Alfonzo
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

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