Literature DB >> 16593729

Isolation and characterization of the actin gene from Tetrahymena thermophila.

C G Cupples1, R E Pearlman.   

Abstract

The macronucleus of Tetrahymena thermophila contains a single actin gene. We have isolated this gene from a partial plasmid library by using the yeast actin gene as a probe. The nucleotide sequence of the gene has been determined and the amino acid sequence of the potential protein deduced. The encoded protein is 375 amino acids long, one amino acid longer than the yeast actin. It is one of the most divergent actins sequenced to date, being only 75% homologous to yeast actin. Unlike the actin genes from most other organisms, it does not contain introns. The coding region contains TAA and TAG codons; the translation termination codon is TGA. Comparison of the amino acid sequence of the Tetrahymena actin with that of actins from other organisms suggests that TAG may code for glutamic acid. The gene is transcribed from multiple initiation sites between 57 and 98 nucleotides upstream of the translation start codon. The 5' flanking region is very A+T-rich and contains numerous "TATA-like" sequences upstream of the transcription start sites.

Entities:  

Year:  1986        PMID: 16593729      PMCID: PMC323910          DOI: 10.1073/pnas.83.14.5160

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  Amino acid sequence of cytochrome c from Tetrahymena pyriformis Phenoset A.

Authors:  G E Tarr; W M Fitch
Journal:  Biochem J       Date:  1976-11       Impact factor: 3.857

2.  Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

Authors:  A J Berk; P A Sharp
Journal:  Cell       Date:  1977-11       Impact factor: 41.582

3.  Nucleotide sequence of a macronuclear DNA molecule coding for alpha-tubulin from the ciliate Stylonychia lemnae. Special codon usage: TAA is not a translation termination codon.

Authors:  E Helftenbein
Journal:  Nucleic Acids Res       Date:  1985-01-25       Impact factor: 16.971

4.  Amino-acid sequence of Tetrahymena histone H4 differs from that of higher eukaryotes.

Authors:  C V Glover; M A Gorovsky
Journal:  Proc Natl Acad Sci U S A       Date:  1979-02       Impact factor: 11.205

5.  Isolation of micro- and macronuclei of Tetrahymena pyriformis.

Authors:  M A Gorovsky; M C Yao; J B Keevert; G L Pleger
Journal:  Methods Cell Biol       Date:  1975       Impact factor: 1.441

6.  The amino acid sequence of Physarum actin.

Authors:  J Vandekerckhove; K Weber
Journal:  Nature       Date:  1978-12-14       Impact factor: 49.962

7.  At least six different actins are expressed in a higher mammal: an analysis based on the amino acid sequence of the amino-terminal tryptic peptide.

Authors:  J Vandekerckhove; K Weber
Journal:  J Mol Biol       Date:  1978-12-25       Impact factor: 5.469

8.  An unusual genetic code in nuclear genes of Tetrahymena.

Authors:  S Horowitz; M A Gorovsky
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Tetrahymena thermophila glutamine tRNA and its gene that corresponds to UAA termination codon.

Authors:  Y Kuchino; N Hanyu; F Tashiro; S Nishimura
Journal:  Proc Natl Acad Sci U S A       Date:  1985-07       Impact factor: 11.205

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  43 in total

1.  Molecular characterization of SerH3, a Tetrahymena thermophila gene encoding a temperature-regulated surface antigen.

Authors:  M M Tondravi; R L Willis; H D Love; G A Bannon
Journal:  Mol Cell Biol       Date:  1990-11       Impact factor: 4.272

2.  The yeast type II myosin heavy chain: analysis of its predicted polypeptide sequence.

Authors:  F P Sweeney; M J Pocklington; E Orr
Journal:  J Muscle Res Cell Motil       Date:  1991-02       Impact factor: 2.698

3.  The single-copy actin gene of Phytophthora megasperma encodes a protein considerably diverged from any other known actin.

Authors:  R Dudler
Journal:  Plant Mol Biol       Date:  1990-03       Impact factor: 4.076

4.  Characterization of the promoter region of Tetrahymena genes.

Authors:  C F Brunk; L A Sadler
Journal:  Nucleic Acids Res       Date:  1990-01-25       Impact factor: 16.971

5.  The actin gene ACT1 is required for phagocytosis, motility, and cell separation of Tetrahymena thermophila.

Authors:  Norman E Williams; Che-Chia Tsao; Josephine Bowen; Gery L Hehman; Ruth J Williams; Joseph Frankel
Journal:  Eukaryot Cell       Date:  2006-03

6.  Nonrandom CpG mutations affect the synonymous codon usage of moderately GC-rich single copy actin genes.

Authors:  G Drouin
Journal:  J Mol Evol       Date:  1991-09       Impact factor: 2.395

7.  Similarity of the three-dimensional structures of actin and the ATPase fragment of a 70-kDa heat shock cognate protein.

Authors:  K M Flaherty; D B McKay; W Kabsch; K C Holmes
Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-01       Impact factor: 11.205

8.  UGA is translated as cysteine in pheromone 3 of Euplotes octocarinatus.

Authors:  F Meyer; H J Schmidt; E Plümper; A Hasilik; G Mersmann; H E Meyer; A Engström; K Heckmann
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

9.  Formaldehyde cross-linking and immunoprecipitation demonstrate developmental changes in H1 association with transcriptionally active genes.

Authors:  P C Dedon; J A Soults; C D Allis; M A Gorovsky
Journal:  Mol Cell Biol       Date:  1991-03       Impact factor: 4.272

10.  Blepharisma uses UAA as a termination codon.

Authors:  A Liang; K Heckmann
Journal:  Naturwissenschaften       Date:  1993-05
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