Literature DB >> 1996118

Formaldehyde cross-linking and immunoprecipitation demonstrate developmental changes in H1 association with transcriptionally active genes.

P C Dedon1, J A Soults, C D Allis, M A Gorovsky.   

Abstract

The in vivo association of histone H1 with specific genes in Tetrahymena thermophila was studied by using a simplified cross-linking and immunoprecipitation technique. Four genes were analyzed whose activities vary in three different developmental states (logarithmic growth, starvation, and conjugation). Hybridization of the immunoprecipitated DNA to cloned probes showed an inverse correlation between the level of immunoprecipitation with H1 antiserum and transcriptional activity. This represents the first demonstration of an alteration in histone H1-DNA interaction associated with developmental changes in transcriptional activity.

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Year:  1991        PMID： 1996118      PMCID： PMC369483          DOI： 10.1128/mcb.11.3.1729-1733.1991

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN： 0270-7306            Impact factor:   4.272


  34 in total

1.  RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells.

Authors:  D S Gilmour; J T Lis
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

2.  Detailed transcription map of the extrachromosomal ribosomal RNA genes in Tetrahymena thermophila.

Authors:  J Engberg; W A Eckert; W Kaffenberger; R E Pearlman
Journal:  J Mol Biol       Date:  1980-09-25       Impact factor: 5.469

3.  The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

Authors:  C Wu
Journal:  Nature       Date:  1980-08-28       Impact factor: 49.962

4.  General method for isolation of DNA sequences that interact with specific nuclear proteins in chromosomes: binding of the high mobility group protein HMG-T to a subset of the protamine gene family.

Authors:  J Blanco; J C States; G H Dixon
Journal:  Biochemistry       Date:  1985-12-31       Impact factor: 3.162

5.  Cloning of abundant mRNA species present during conjugation of Tetrahymena thermophila: identification of mRNA species present exclusively during meiosis.

Authors:  D W Martindale; P J Bruns
Journal:  Mol Cell Biol       Date:  1983-10       Impact factor: 4.272

6.  RNA and protein synthesis during meiotic prophase in Tetrahymena thermophila.

Authors:  D W Martindale; C D Allis; P J Bruns
Journal:  J Protozool       Date:  1985-11

7.  The transcriptional regulation of Xenopus 5s RNA genes in chromatin: the roles of active stable transcription complexes and histone H1.

Authors:  M S Schlissel; D D Brown
Journal:  Cell       Date:  1984-07       Impact factor: 41.582

8.  Regulation of protein synthesis in Tetrahymena. RNA sequence sets of growing and starved cells.

Authors:  F J Calzone; V A Stathopoulos; D Grass; M A Gorovsky; R C Angerer
Journal:  J Biol Chem       Date:  1983-06-10       Impact factor: 5.157

9.  Chemical composition of nucleosomes among domains of calf thymus chromatin differing in micrococcal nuclease accessibility and solubility properties.

Authors:  J R Davie; C A Saunders
Journal:  J Biol Chem       Date:  1981-12-10       Impact factor: 5.157

10.  Dominant and specific repression of Xenopus oocyte 5S RNA genes and satellite I DNA by histone H1.

Authors:  A P Wolffe
Journal:  EMBO J       Date:  1989-02       Impact factor: 11.598
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  32 in total

1.  The distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin: distribution in human fetal fibroblasts.

Authors:  M H Parseghian; R L Newcomb; S T Winokur; B A Hamkalo
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

2.  Chromatin immunoprecipitation and microarray-based analysis of protein location.

Authors:  Tong Ihn Lee; Sarah E Johnstone; Richard A Young
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

Review 3.  The current state of chromatin immunoprecipitation.

Authors:  Philippe Collas
Journal:  Mol Biotechnol       Date:  2010-05       Impact factor: 2.695

4.  Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymerase III.

Authors:  C Tse; T Sera; A P Wolffe; J C Hansen
Journal:  Mol Cell Biol       Date:  1998-08       Impact factor: 4.272

5.  Prolonged glucocorticoid exposure dephosphorylates histone H1 and inactivates the MMTV promoter.

Authors:  H L Lee; T K Archer
Journal:  EMBO J       Date:  1998-03-02       Impact factor: 11.598

6.  Chromatin structure and methylation of rat rRNA genes studied by formaldehyde fixation and psoralen cross-linking.

Authors:  I Stancheva; R Lucchini; T Koller; J M Sogo
Journal:  Nucleic Acids Res       Date:  1997-05-01       Impact factor: 16.971

7.  An abundant nucleolar phosphoprotein is associated with ribosomal DNA in Tetrahymena macronuclei.

Authors:  K E McGrath; J F Smothers; C A Dadd; M T Madireddi; M A Gorovsky; C D Allis
Journal:  Mol Biol Cell       Date:  1997-01       Impact factor: 4.138

8.  RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena.

Authors:  Yifan Liu; Sean D Taverna; Tara L Muratore; Jeffrey Shabanowitz; Donald F Hunt; C David Allis
Journal:  Genes Dev       Date:  2007-06-15       Impact factor: 11.361

9.  Either of the major H2A genes but not an evolutionarily conserved H2A.F/Z variant of Tetrahymena thermophila can function as the sole H2A gene in the yeast Saccharomyces cerevisiae.

Authors:  X Liu; J Bowen; M A Gorovsky
Journal:  Mol Cell Biol       Date:  1996-06       Impact factor: 4.272

10.  ChAP-MS: a method for identification of proteins and histone posttranslational modifications at a single genomic locus.

Authors:  Stephanie D Byrum; Ana Raman; Sean D Taverna; Alan J Tackett
Journal:  Cell Rep       Date:  2012-07-20       Impact factor: 9.423
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