Literature DB >> 16545956

Mechanism of a genetic glissando: structural biology of indel mutations.

Miguel Garcia-Diaz1, Thomas A Kunkel.   

Abstract

Insertions and deletions of bases in DNA (collectively termed "indels") are both common and biologically relevant, being associated with different human pathologies including cancer and diseases associated with expansions of repeats. Four decades of research have resulted in several hypotheses regarding how indels are generated during DNA synthesis and how they subsequently undergo or escape correction. Recent structural studies of DNA polymerases bound to mutagenic substrates have increased our understanding of how DNA polymerases cope with abnormal substrates. These structures provide insight into the molecular mechanisms underlying indel generation.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16545956     DOI: 10.1016/j.tibs.2006.02.004

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  79 in total

1.  Error-prone DNA repair activity during somatic hypermutation in shark B lymphocytes.

Authors:  Catherine Zhu; Ellen Hsu
Journal:  J Immunol       Date:  2010-10-04       Impact factor: 5.422

2.  A study on mutational dynamics of simple sequence repeats in relation to mismatch repair system in prokaryotic genomes.

Authors:  Pankaj Kumar; H A Nagarajaram
Journal:  J Mol Evol       Date:  2012-03-14       Impact factor: 2.395

3.  Differential correction of lagging-strand replication errors made by DNA polymerases {alpha} and {delta}.

Authors:  Stephanie A Nick McElhinny; Grace E Kissling; Thomas A Kunkel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

4.  Multiple solutions to inefficient lesion bypass by T7 DNA polymerase.

Authors:  Scott D McCulloch; Thomas A Kunkel
Journal:  DNA Repair (Amst)       Date:  2006-07-28

5.  An unusual pattern of spontaneous mutations recovered in the halophilic archaeon Haloferax volcanii.

Authors:  Reena R Mackwan; Geraldine T Carver; John W Drake; Dennis W Grogan
Journal:  Genetics       Date:  2006-12-28       Impact factor: 4.562

Review 6.  The X family portrait: structural insights into biological functions of X family polymerases.

Authors:  Andrea F Moon; Miguel Garcia-Diaz; Vinod K Batra; William A Beard; Katarzyna Bebenek; Thomas A Kunkel; Samuel H Wilson; Lars C Pedersen
Journal:  DNA Repair (Amst)       Date:  2007-07-12

Review 7.  The fidelity of DNA synthesis by eukaryotic replicative and translesion synthesis polymerases.

Authors:  Scott D McCulloch; Thomas A Kunkel
Journal:  Cell Res       Date:  2008-01       Impact factor: 25.617

8.  Error-prone replication bypass of the imidazole ring-opened formamidopyrimidine deoxyguanosine adduct.

Authors:  Yan Sha; Irina G Minko; Chanchal K Malik; Carmelo J Rizzo; R Stephen Lloyd
Journal:  Environ Mol Mutagen       Date:  2017-04-24       Impact factor: 3.216

Review 9.  Evolving views of DNA replication (in)fidelity.

Authors:  T A Kunkel
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2009-11-10

10.  Variable Spontaneous Mutation and Loss of Heterozygosity among Heterozygous Genomes in Yeast.

Authors:  Duong T Nguyen; Baojun Wu; Hongan Long; Nan Zhang; Caitlyn Patterson; Stephen Simpson; Krystalynne Morris; W Kelley Thomas; Michael Lynch; Weilong Hao
Journal:  Mol Biol Evol       Date:  2020-11-01       Impact factor: 16.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.