Literature DB >> 16543462

An equivalence principle for the incorporation of favorable mutations in asexual populations.

Matthew Hegreness1, Noam Shoresh, Daniel Hartl, Roy Kishony.   

Abstract

Rapid evolution of asexual populations, such as that of cancer cells or of microorganisms developing drug resistance, can include the simultaneous spread of distinct beneficial mutations. We demonstrate that evolution in such cases is driven by the fitness effects and appearance times of only a small minority of favorable mutations. The complexity of the mutation-selection process is thereby greatly reduced, and much of the evolutionary dynamics can be encapsulated in two parameters-an effective selection coefficient and effective rate of beneficial mutations. We confirm this theoretical finding and estimate the effective parameters for evolving populations of fluorescently labeled Escherichia coli. The effective parameters constitute a simple description and provide a natural standard for comparing adaptation between species and across environments.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16543462     DOI: 10.1126/science.1122469

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  117 in total

1.  Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations.

Authors:  Benjamin H Good; Igor M Rouzine; Daniel J Balick; Oskar Hallatschek; Michael M Desai
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-27       Impact factor: 11.205

Review 2.  Beneficial mutations and the dynamics of adaptation in asexual populations.

Authors:  Paul D Sniegowski; Philip J Gerrish
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

3.  Mutational effects and population dynamics during viral adaptation challenge current models.

Authors:  Craig R Miller; Paul Joyce; Holly A Wichman
Journal:  Genetics       Date:  2010-11-01       Impact factor: 4.562

4.  Fitness analyses of all possible point mutations for regions of genes in yeast.

Authors:  Ryan Hietpas; Benjamin Roscoe; Li Jiang; Daniel N A Bolon
Journal:  Nat Protoc       Date:  2012-06-21       Impact factor: 13.491

5.  Collective Fluctuations in the Dynamics of Adaptation and Other Traveling Waves.

Authors:  Oskar Hallatschek; Lukas Geyrhofer
Journal:  Genetics       Date:  2016-01-27       Impact factor: 4.562

6.  H. J. Muller and the "competition hoax".

Authors:  James F Crow
Journal:  Genetics       Date:  2006-06       Impact factor: 4.562

7.  Parallel changes in global protein profiles during long-term experimental evolution in Escherichia coli.

Authors:  Ludovic Pelosi; Lauriane Kühn; Dorian Guetta; Jérôme Garin; Johannes Geiselmann; Richard E Lenski; Dominique Schneider
Journal:  Genetics       Date:  2006-05-15       Impact factor: 4.562

8.  The distribution of beneficial mutant effects under strong selection.

Authors:  Rowan D H Barrett; Leithen K M'Gonigle; Sarah P Otto
Journal:  Genetics       Date:  2006-10-08       Impact factor: 4.562

9.  Complete genetic linkage can subvert natural selection.

Authors:  Philip J Gerrish; Alexandre Colato; Alan S Perelson; Paul D Sniegowski
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-03       Impact factor: 11.205

10.  Genome-wide mutational diversity in an evolving population of Escherichia coli.

Authors:  J E Barrick; R E Lenski
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2009-09-23
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.