Literature DB >> 16510896

The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction.

Guillaume Bourque1, Glenn Tesler, Pavel A Pevzner.   

Abstract

Mesh：

Year:  2006        PMID： 16510896      PMCID： PMC1415205          DOI： 10.1101/gr.4631806

Source DB:  PubMed          Journal:  Genome Res        ISSN： 1088-9051            Impact factor:   9.043


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  10 in total

1.  Genome-scale evolution: reconstructing gene orders in the ancestral species.

Authors:  Guillaume Bourque; Pavel A Pevzner
Journal:  Genome Res       Date:  2002-01       Impact factor: 9.043

Review 2.  Origins of primate chromosomes - as delineated by Zoo-FISH and alignments of human and mouse draft genome sequences.

Authors:  L Froenicke
Journal:  Cytogenet Genome Res       Date:  2005       Impact factor: 1.636

3.  Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps.

Authors:  William J Murphy; Denis M Larkin; Annelie Everts-van der Wind; Guillaume Bourque; Glenn Tesler; Loretta Auvil; Jonathan E Beever; Bhanu P Chowdhary; Francis Galibert; Lisa Gatzke; Christophe Hitte; Stacey N Meyers; Denis Milan; Elaine A Ostrander; Greg Pape; Heidi G Parker; Terje Raudsepp; Margarita B Rogatcheva; Lawrence B Schook; Loren C Skow; Michael Welge; James E Womack; Stephen J O'brien; Pavel A Pevzner; Harris A Lewin
Journal:  Science       Date:  2005-07-22       Impact factor: 47.728

4.  Are molecular cytogenetics and bioinformatics suggesting diverging models of ancestral mammalian genomes?

Authors:  Lutz Froenicke; Montserrat Garcia Caldés; Alexander Graphodatsky; Stefan Müller; Leslie A Lyons; Terence J Robinson; Marianne Volleth; Fengtang Yang; Johannes Wienberg
Journal:  Genome Res       Date:  2006-03       Impact factor: 9.043

5.  Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages.

Authors:  Guillaume Bourque; Evgeny M Zdobnov; Peer Bork; Pavel A Pevzner; Glenn Tesler
Journal:  Genome Res       Date:  2004-12-08       Impact factor: 9.043

Review 6.  The evolution of eutherian chromosomes.

Authors:  Johannes Wienberg
Journal:  Curr Opin Genet Dev       Date:  2004-12       Impact factor: 5.578

7.  Reconstructing the genomic architecture of ancestral mammals: lessons from human, mouse, and rat genomes.

Authors:  Guillaume Bourque; Pavel A Pevzner; Glenn Tesler
Journal:  Genome Res       Date:  2004-04       Impact factor: 9.043

Review 8.  Emerging patterns of comparative genome organization in some mammalian species as revealed by Zoo-FISH.

Authors:  B P Chowdhary; T Raudsepp; L Frönicke; H Scherthan
Journal:  Genome Res       Date:  1998-06       Impact factor: 9.043

9.  Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution.

Authors: 
Journal:  Nature       Date:  2004-12-09       Impact factor: 49.962

10.  Reconstructing the genomic architecture of mammalian ancestors using multispecies comparative maps.

Authors:  William J Murphy; Guillaume Bourque; Glenn Tesler; Pavel Pevzner; Stephen J O'Brien
Journal:  Hum Genomics       Date:  2003-11       Impact factor: 4.639
  10 in total
  13 in total

Review 1.  Addressing chromosome evolution in the whole-genome sequence era.

Authors:  Thomas Faraut
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

2.  Divergent patterns of breakpoint reuse in Muroid rodents.

Authors:  E E Mlynarski; C J Obergfell; M J O'Neill; R J O'Neill
Journal:  Mamm Genome       Date:  2009-12-22       Impact factor: 2.957

3.  DUPCAR: reconstructing contiguous ancestral regions with duplications.

Authors:  Jian Ma; Aakrosh Ratan; Brian J Raney; Bernard B Suh; Louxin Zhang; Webb Miller; David Haussler
Journal:  J Comput Biol       Date:  2008-10       Impact factor: 1.479

4.  Testing chromosomal phylogenies and inversion breakpoint reuse in Drosophila.

Authors:  Josefa González; Ferran Casals; Alfredo Ruiz
Journal:  Genetics       Date:  2006-10-08       Impact factor: 4.562

5.  Gene alterations at Drosophila inversion breakpoints provide prima facie evidence for natural selection as an explanation for rapid chromosomal evolution.

Authors:  Yolanda Guillén; Alfredo Ruiz
Journal:  BMC Genomics       Date:  2012-02-01       Impact factor: 3.969

6.  Reconstructing contiguous regions of an ancestral genome.

Authors:  Jian Ma; Louxin Zhang; Bernard B Suh; Brian J Raney; Richard C Burhans; W James Kent; Mathieu Blanchette; David Haussler; Webb Miller
Journal:  Genome Res       Date:  2006-09-18       Impact factor: 9.043

7.  Breakpoint graphs and ancestral genome reconstructions.

Authors:  Max A Alekseyev; Pavel A Pevzner
Journal:  Genome Res       Date:  2009-02-13       Impact factor: 9.043

8.  Recovering genome rearrangements in the mammalian phylogeny.

Authors:  Hao Zhao; Guillaume Bourque
Journal:  Genome Res       Date:  2009-05       Impact factor: 9.043

9.  Tracking genome organization in rodents by Zoo-FISH.

Authors:  Alexander S Graphodatsky; Fengtang Yang; Gauthier Dobigny; Svetlana A Romanenko; Larisa S Biltueva; Polina L Perelman; Violetta R Beklemisheva; Elena Z Alkalaeva; Natalya A Serdukova; Malcolm A Ferguson-Smith; William J Murphy; Terence J Robinson
Journal:  Chromosome Res       Date:  2008-02-11       Impact factor: 5.239

10.  Gene synteny comparisons between different vertebrates provide new insights into breakage and fusion events during mammalian karyotype evolution.

Authors:  Claus Kemkemer; Matthias Kohn; David N Cooper; Lutz Froenicke; Josef Högel; Horst Hameister; Hildegard Kehrer-Sawatzki
Journal:  BMC Evol Biol       Date:  2009-04-24       Impact factor: 3.260
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