Literature DB >> 16428483

Proteomic-based discovery and characterization of glycosylated eosinophil-derived neurotoxin and COOH-terminal osteopontin fragments for ovarian cancer in urine.

Bin Ye1, Steven Skates, Samuel C Mok, Nora K Horick, Helene F Rosenberg, Allison Vitonis, Dale Edwards, Patrick Sluss, Won K Han, Ross S Berkowitz, Daniel W Cramer.   

Abstract

PURPOSE: The objective was to identify and characterize low molecular weight proteins/peptides in urine and their posttranslational modifications that might be used as a screening tool for ovarian cancer. EXPERIMENTAL
DESIGN: Urine samples collected preoperatively from postmenopausal women with ovarian cancer and benign conditions and from nonsurgical controls were analyzed by surface-enhanced laser desorption/ionization mass spectrometry and two-dimensional gel electrophoresis. Selected proteins from mass profiles were purified by chromatography and followed by liquid chromatography-tandem mass spectrometry sequence analysis. Specific antibodies were generated for further characterization, including immunoprecipitation and glycosylation. Quantitative and semiquantitative ELISAs were developed for preliminary validation in patients of 128 ovarian cancer, 52 benign conditions, 44 other cancers, and 188 healthy controls.
RESULTS: A protein (m/z approximately 17,400) with higher peak intensities in cancer patients than in benign conditions and controls was identified and subsequently defined as eosinophil-derived neurotoxin (EDN). A glycosylated form of EDN was specifically elevated in ovarian cancer patients. A cluster of COOH-terminal osteopontin was identified from two-dimensional gels of urine from cancer patients. Modified forms EDN and osteopontin fragments were elevated in early-stage ovarian cancers and a combination of both resulted to 93% specificity and 72% sensitivity.
CONCLUSIONS: Specific elevated posttranslationally modified urinary EDN and osteopontin COOH-terminal fragments in ovarian cancer might lead to potential noninvasive screening tests for early diagnosis. Urine with less complexity than serum and relatively high thermodynamic stability of peptides or metabolites is a promising study medium for discovery of the novel biomarkers which may present in many non-urinary tract neoplastic diseases.

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Year:  2006        PMID: 16428483     DOI: 10.1158/1078-0432.CCR-05-0461

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  45 in total

1.  Lysine-based zwitterionic molecular micelle for simultaneous separation of acidic and basic proteins using open tubular capillary electrochromatography.

Authors:  Leonard Moore; Zorabel M LeJeune; Candace A Luces; Arther T Gates; Min Li; Bilal El-Zahab; Jayne C Garno; Isiah M Warner
Journal:  Anal Chem       Date:  2010-05-15       Impact factor: 6.986

Review 2.  Urine collection and processing for protein biomarker discovery and quantification.

Authors:  C Eric Thomas; Wade Sexton; Kaaron Benson; Rebecca Sutphen; John Koomen
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-23       Impact factor: 4.254

3.  Early detection of ovarian cancer.

Authors:  Partha M Das; Robert C Bast
Journal:  Biomark Med       Date:  2008-06       Impact factor: 2.851

4.  Integration of cell phone imaging with microchip ELISA to detect ovarian cancer HE4 biomarker in urine at the point-of-care.

Authors:  Shuqi Wang; Xiaohu Zhao; Imran Khimji; Ragip Akbas; Weiliang Qiu; Dale Edwards; Daniel W Cramer; Bin Ye; Utkan Demirci
Journal:  Lab Chip       Date:  2011-09-01       Impact factor: 6.799

5.  Detection of the HE4 protein in urine as a biomarker for ovarian neoplasms.

Authors:  Ingegerd Hellstrom; Patrick J Heagerty; Elizabeth M Swisher; Pu Liu; Jade Jaffar; Kathy Agnew; Karl Erik Hellstrom
Journal:  Cancer Lett       Date:  2010-04-08       Impact factor: 8.679

Review 6.  Proteomic analysis in cancer research: potential application in clinical use.

Authors:  Jesús García-Foncillas; Eva Bandrés; Ruth Zárate; Natalia Remírez
Journal:  Clin Transl Oncol       Date:  2006-04       Impact factor: 3.405

7.  fTwo novel biomarkers, mesothelin and HE4, for diagnosis of ovarian carcinoma.

Authors:  Ingegerd Hellstrom; Karl Erik Hellstrom
Journal:  Expert Opin Med Diagn       Date:  2011-05-01

8.  A proteomic analysis of IVF follicular fluid in women <or=32 years old.

Authors:  Stephanie J Estes; Bin Ye; Weiliang Qiu; Daniel Cramer; Mark D Hornstein; Stacey A Missmer
Journal:  Fertil Steril       Date:  2008-11-05       Impact factor: 7.329

9.  Patients with ovarian carcinoma excrete different altered levels of urine CD59, kininogen-1 and fragments of inter-alpha-trypsin inhibitor heavy chain H4 and albumin.

Authors:  Siti S Abdullah-Soheimi; Boon-Kiong Lim; Onn H Hashim; Adawiyah S Shuib
Journal:  Proteome Sci       Date:  2010-11-17       Impact factor: 2.480

Review 10.  The proteogenomic path towards biomarker discovery.

Authors:  Tara K Sigdel; Minnie M Sarwal
Journal:  Pediatr Transplant       Date:  2008-08-22
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