Literature DB >> 16371706

The Structural Biology Center 19ID undulator beamline: facility specifications and protein crystallographic results.

Gerd Rosenbaum1, Randy W Alkire, Gwyndaf Evans, Frank J Rotella, Krzystof Lazarski, Rong Guang Zhang, Stephan L Ginell, Norma Duke, Istvan Naday, Jack Lazarz, Michael J Molitsky, Lisa Keefe, John Gonczy, Larry Rock, Ruslan Sanishvili, Martin A Walsh, Edwin Westbrook, Andrzej Joachimiak.   

Abstract

The 19ID undulator beamline of the Structure Biology Center has been designed and built to take full advantage of the high flux, brilliance and quality of X-ray beams delivered by the Advanced Photon Source. The beamline optics are capable of delivering monochromatic X-rays with photon energies from 3.5 to 20 keV (3.5-0.6 A wavelength) with fluxes up to 8-18 x 10(12) photons s(-1) (depending on photon energy) onto cryogenically cooled crystal samples. The size of the beam (full width at half-maximum) at the sample position can be varied from 2.2 mm x 1.0 mm (horizontal x vertical, unfocused) to 0.083 mm x 0.020 mm in its fully focused configuration. Specimen-to-detector distances of between 100 mm and 1500 mm can be used. The high flexibility, inherent in the design of the optics, coupled with a kappa-geometry goniometer and beamline control software allows optimal strategies to be adopted in protein crystallographic experiments, thus maximizing the chances of their success. A large-area mosaic 3 x 3 CCD detector allows high-quality diffraction data to be measured rapidly to the crystal diffraction limits. The beamline layout and the X-ray optical and endstation components are described in detail, and the results of representative crystallographic experiments are presented.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16371706      PMCID: PMC2603069          DOI: 10.1107/S0909049505036721

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  34 in total

1.  Structure of cyanase reveals that a novel dimeric and decameric arrangement of subunits is required for formation of the enzyme active site.

Authors:  M A Walsh; Z Otwinowski; A Perrakis; P M Anderson; A Joachimiak
Journal:  Structure       Date:  2000-05-15       Impact factor: 5.006

2.  Integration of macromolecular diffraction data.

Authors:  A G Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-10

3.  Cool data: quantity AND quality.

Authors:  E Garman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-10

4.  MAD data collection - current trends.

Authors:  M A Walsh; G Evans; R Sanishvili; I Dementieva; A Joachimiak
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-10

5.  The finer things in X-ray diffraction data collection.

Authors:  J W Pflugrath
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-10

6.  The 2.8 A crystal structure of visual arrestin: a model for arrestin's regulation.

Authors:  J A Hirsch; C Schubert; V V Gurevich; P B Sigler
Journal:  Cell       Date:  1999-04-16       Impact factor: 41.582

7.  Crystal structure of rhodopsin: A G protein-coupled receptor.

Authors:  K Palczewski; T Kumasaka; T Hori; C A Behnke; H Motoshima; B A Fox; I Le Trong; D C Teller; T Okada; R E Stenkamp; M Yamamoto; M Miyano
Journal:  Science       Date:  2000-08-04       Impact factor: 47.728

8.  Automated protein model building combined with iterative structure refinement.

Authors:  A Perrakis; R Morris; V S Lamzin
Journal:  Nat Struct Biol       Date:  1999-05

9.  Taking MAD to the extreme: ultrafast protein structure determination.

Authors:  M A Walsh; I Dementieva; G Evans; R Sanishvili; A Joachimiak
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-06

10.  Three-dimensional structure of the Tn5 synaptic complex transposition intermediate.

Authors:  D R Davies; I Y Goryshin; W S Reznikoff; I Rayment
Journal:  Science       Date:  2000-07-07       Impact factor: 47.728

View more
  112 in total

1.  Alternaria alternata allergen Alt a 1: a unique β-barrel protein dimer found exclusively in fungi.

Authors:  Maksymilian Chruszcz; Martin D Chapman; Tomasz Osinski; Robert Solberg; Matthew Demas; Przemyslaw J Porebski; Karolina A Majorek; Anna Pomés; Wladek Minor
Journal:  J Allergy Clin Immunol       Date:  2012-06-02       Impact factor: 10.793

2.  Crystal structure of the novel PaiB transcriptional regulator from Geobacillus stearothermophilus.

Authors:  E V Filippova; J S Brunzelle; M E Cuff; H Li; A Joachimiak; W F Anderson
Journal:  Proteins       Date:  2011-06-01

3.  Comparison of hydrogen determination with X-ray and neutron crystallography in a human aldose reductase-inhibitor complex.

Authors:  M P Blakeley; A Mitschler; I Hazemann; F Meilleur; D A A Myles; A Podjarny
Journal:  Eur Biophys J       Date:  2006-04-19       Impact factor: 1.733

4.  Molecular determinants for antibody binding on group 1 house dust mite allergens.

Authors:  Maksymilian Chruszcz; Anna Pomés; Jill Glesner; Lisa D Vailes; Tomasz Osinski; Przemyslaw J Porebski; Karolina A Majorek; Peter W Heymann; Thomas A E Platts-Mills; Wladek Minor; Martin D Chapman
Journal:  J Biol Chem       Date:  2011-12-30       Impact factor: 5.157

5.  Structure of a short-chain dehydrogenase/reductase from Bacillus anthracis.

Authors:  Jing Hou; Kamila Wojciechowska; Heping Zheng; Maksymilian Chruszcz; David R Cooper; Marcin Cymborowski; Tatiana Skarina; Elena Gordon; Haibin Luo; Alexei Savchenko; Wladek Minor
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-05-24

6.  In situ X-ray data collection and structure phasing of protein crystals at Structural Biology Center 19-ID.

Authors:  Karolina Michalska; Kemin Tan; Changsoo Chang; Hui Li; Catherine Hatzos-Skintges; Michael Molitsky; Randy Alkire; Andrzej Joachimiak
Journal:  J Synchrotron Radiat       Date:  2015-10-15       Impact factor: 2.616

7.  Structural studies of ROK fructokinase YdhR from Bacillus subtilis: insights into substrate binding and fructose specificity.

Authors:  B Nocek; A J Stein; R Jedrzejczak; M E Cuff; H Li; L Volkart; A Joachimiak
Journal:  J Mol Biol       Date:  2010-12-23       Impact factor: 5.469

8.  Functional Profiling and Crystal Structures of Isothiocyanate Hydrolases Found in Gut-Associated and Plant-Pathogenic Bacteria.

Authors:  Tijs J M van den Bosch; Kemin Tan; Andrzej Joachimiak; Cornelia U Welte
Journal:  Appl Environ Microbiol       Date:  2018-07-02       Impact factor: 4.792

9.  Structural and biochemical characterization of the type II fructose-1,6-bisphosphatase GlpX from Escherichia coli.

Authors:  Greg Brown; Alexander Singer; Vladimir V Lunin; Michael Proudfoot; Tatiana Skarina; Robert Flick; Samvel Kochinyan; Ruslan Sanishvili; Andrzej Joachimiak; Aled M Edwards; Alexei Savchenko; Alexander F Yakunin
Journal:  J Biol Chem       Date:  2008-12-10       Impact factor: 5.157

10.  Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis.

Authors:  Greg Brown; Alex Singer; Michael Proudfoot; Tatiana Skarina; Youngchang Kim; Changsoo Chang; Irina Dementieva; Ekaterina Kuznetsova; Claudio F Gonzalez; Andrzej Joachimiak; Alexei Savchenko; Alexander F Yakunin
Journal:  Biochemistry       Date:  2008-05-06       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.