Literature DB >> 16331420

Applications of variable-angle sample spinning experiments to the measurement of scaled residual dipolar couplings and 15N CSA in soluble proteins.

Nathalie Lancelot1, Karim Elbayed, Martial Piotto.   

Abstract

NMR spectra of ubiquitin in the presence of bicelles at a concentration of 32% w/v have been recorded at 700 MHz under sample spinning conditions at the magic angle (54.7 degrees ) and at an angle of 45.5 degrees . At the magic angle, the 1H-15N HSQC spectrum of ubiquitin in bicelles is virtually indistinguishable from the one recorded on the protein in solution. Spinning the sample at the magic angle creates an isotropic environment with no preferred bicelle orientations, thus allowing the determination of scalar coupling constants. For an angle of rotation of 45.5 degrees , the bicelles orient with their normal perpendicular to the spinning axis leading to the observation of strong residual dipolar couplings and chemical shift variations of the 15N resonances.

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Year:  2005        PMID: 16331420     DOI: 10.1007/s10858-005-3210-1

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  19 in total

1.  Sign determination of dipolar couplings in field-oriented bicelles by variable angle sample spinning (VASS).

Authors:  F Tian; J A Losonczi; M W Fischer; J H Prestegard
Journal:  J Biomol NMR       Date:  1999-10       Impact factor: 2.835

Review 2.  NMR structures of biomolecules using field oriented media and residual dipolar couplings.

Authors:  J H Prestegard; H M al-Hashimi; J R Tolman
Journal:  Q Rev Biophys       Date:  2000-11       Impact factor: 5.318

3.  Switched-angle spinning applied to bicelles containing phospholipid-associated peptides.

Authors:  Giorgia Zandomeneghi; Philip T F Williamson; Andreas Hunkeler; Beat H Meier
Journal:  J Biomol NMR       Date:  2003-02       Impact factor: 2.835

4.  Practical aspects of shimming a high resolution magic angle spinning probe.

Authors:  Martial Piotto; Karim Elbayed; Jean-Michel Wieruszeski; Guy Lippens
Journal:  J Magn Reson       Date:  2005-03       Impact factor: 2.229

5.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

6.  Carbon-13 nuclear magnetic resonance spectroscopy of lipids: differential line broadening due to cross-correlation effects as a probe of membrane structure.

Authors:  E Oldfield; F Adebodun; J Chung; B Montez; K D Park; H B Le; B Phillips
Journal:  Biochemistry       Date:  1991-11-19       Impact factor: 3.162

7.  Characterization of magnetically orientable bilayers in mixtures of dihexanoylphosphatidylcholine and dimyristoylphosphatidylcholine by solid-state NMR.

Authors:  C R Sanders; J P Schwonek
Journal:  Biochemistry       Date:  1992-09-22       Impact factor: 3.162

8.  NMR of bicelles: orientation and mosaic spread of the liquid-crystal director under sample rotation.

Authors:  Giorgia Zandomeneghi; Marco Tomaselli; Philip T F Williamson; Beat H Meier
Journal:  J Biomol NMR       Date:  2003-02       Impact factor: 2.835

9.  Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solution.

Authors:  J R Tolman; J M Flanagan; M A Kennedy; J H Prestegard
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

10.  Molecular orientation and conformation of phosphatidylinositides in membrane mimetics using variable angle sample spinning (VASS) NMR.

Authors:  Anita I Kishore; James H Prestegard
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

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  7 in total

1.  Bicelle-enabled structural studies on a membrane-associated cytochrome B5 by solid-state MAS NMR spectroscopy.

Authors:  Jiadi Xu; Ulrich H N Dürr; Sang-Choul Im; Zhehong Gan; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

2.  Very large residual dipolar couplings from deuterated ubiquitin.

Authors:  Joshua M Ward; Nikolai R Skrynnikov
Journal:  J Biomol NMR       Date:  2012-07-25       Impact factor: 2.835

3.  Biphenyl bicelle disks align perpendicular to magnetic fields on large temperature scales: a study combining synthesis, solid-state NMR, TEM, and SAXS.

Authors:  Cécile Loudet; Sabine Manet; Stéphane Gineste; Reïko Oda; Marie-France Achard; Erick J Dufourc
Journal:  Biophys J       Date:  2007-02-16       Impact factor: 4.033

Review 4.  Spatial reorientation experiments for NMR of solids and partially oriented liquids.

Authors:  Rachel W Martin; John E Kelly; Kelsey A Collier
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2015-10-23       Impact factor: 9.795

5.  Influence of the O-phosphorylation of serine, threonine and tyrosine in proteins on the amidic ¹⁵N chemical shielding anisotropy tensors.

Authors:  Jiří Emmer; Andrea Vavrinská; Vladimír Sychrovský; Ladislav Benda; Zdeněk Kříž; Jaroslav Koča; Rolf Boelens; Vladimír Sklenář; Lukáš Trantírek
Journal:  J Biomol NMR       Date:  2012-12-01       Impact factor: 2.835

Review 6.  Bicelles: A natural 'molecular goniometer' for structural, dynamical and topological studies of molecules in membranes.

Authors:  Anna Diller; Cécile Loudet; Fabien Aussenac; Gérard Raffard; Sylvie Fournier; Michel Laguerre; Axelle Grélard; Stanley J Opella; Francesca M Marassi; Erick J Dufourc
Journal:  Biochimie       Date:  2009-02-25       Impact factor: 4.079

Review 7.  The magic of bicelles lights up membrane protein structure.

Authors:  Ulrich H N Dürr; Melissa Gildenberg; Ayyalusamy Ramamoorthy
Journal:  Chem Rev       Date:  2012-08-24       Impact factor: 60.622

  7 in total

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